Query= MSMg01no458_j19.b1 MSMg01no458_j19.b1 CHROMAT_FILE:
MSMg01no458_j19.b1 PHD_FILE: MSMg01no458_j19.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:31:16 2005
(557 letters)
>mm_chr6_67349267_67350223
Length = 957
Score = 1046 bits (541), Expect = 0.0
Identities = 553/557 (99%)
Strand = Plus / Minus
Query: 1 gctctgttgattttacggtcataaatgattctgattgtgatccttgcatctctgtttaaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 757 gctctgttgattttacggtcataaatgattctgattgtgatccttgcatctctgtttaaa 698
Query: 61 gctgttcctggataaagatattaagcatcaagtaagaggacttccccctcctaaaacaca 120
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 697 gctgttcctggataaagatattaagcatcaagtaaggggacttccccctcctaaaacaca 638
Query: 121 cagctaagtttcagaatgtgaataaagtattgttaaacaaaatattccagccaactaatg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 637 cagctaagtttcagaatgtgaataaagtattgttaaacaaaatattccagccaactaatg 578
Query: 181 caagttttctttcctataattgcataagcaaaaatcttttgcgtggtactgagtttgatg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 577 caagttttctttcctataattgcataagcaaaaatcttttgcgtggtactgagtttgatg 518
Query: 241 tggtgtagcacatattagacaaagcattgtatttacacagacaccggatacctcttccta 300
|||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 517 tggtgtagcacataaaagacaaagcattgtatttacacagacaccggatacctcttccta 458
Query: 301 cgacgtgagaaagagatgacctaagtgtcagctcttacaccccacccctgctctaaataa 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 457 cgacgtgagaaagagatgacctaagtgtcagctcttacaccccacccctgctctaaataa 398
Query: 361 ctttaatgaaataccaggcatcattaccctgaatacataagcttgacagaaactaaatct 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 397 ctttaatgaaataccaggcatcattaccctgaatacataagcttgacagaaactaaatct 338
Query: 421 cagtgttcaggttcattcacaccggattctgcacctctgttgcttaattaatctgcctaa 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 337 cagtgttcaggttcattcacaccggattctgcacctctgttgcttaattaatctgcctaa 278
Query: 481 caaccgctaagatatgggttatcaccattattttatggctaagaaaactaagtatggtct 540
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 277 caaccgctaagatatgggttatcaccattattttatggctaagaaaactaagtatgatct 218
Query: 541 aacatcacctactagtg 557
|||||||||||||||||
Sbjct: 217 aacatcacctactagtg 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 557
Length of database: 957
Length adjustment: 10
Effective length of query: 547
Effective length of database: 947
Effective search space: 518009
Effective search space used: 518009
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no458_j19.g1 MSMg01no458_j19.g1 CHROMAT_FILE:
MSMg01no458_j19.g1 PHD_FILE: MSMg01no458_j19.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:31:16 2005
(580 letters)
>mm_chr6_67186209_67187188
Length = 980
Score = 1077 bits (557), Expect = 0.0
Identities = 577/587 (98%), Gaps = 7/587 (1%)
Strand = Plus / Plus
Query: 1 caggacaaaccctgtctcg------aaaaaaaaaaaaaaaacag-aaaaaaaaacaacaa 53
||||||||||||||||||| ||||||||||||||||||| |||||||||||||||
Sbjct: 194 caggacaaaccctgtctcggaaaaaaaaaaaaaaaaaaaaacagaaaaaaaaaacaacaa 253
Query: 54 acaaacaaaaaaatgtttgagtctttccaactttttaatacttgtaaatgttttaatctt 113
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 254 acaaacaaaataatgtttgagtctttccaactttttaatacttgtaaatgttttaatctt 313
Query: 114 ccctacccagtaaaacttttgtatcctcaaaggcccactgctctctagtctagaaaattg 173
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 314 ccctacccagtaaaacttttgtatcctcaaaggcccactgctctctagtctagaaaattg 373
Query: 174 ttggcttggtacagttgtccttttctccttgaaacagagaccccttgctgttatttacat 233
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 374 ttggcttggtacagttgtccttttctccttgaaacagagaccccttgctgttatttacat 433
Query: 234 ttcttaggcacaagtttttttcagagtagtcaattaaataagactgtgaggaccccagcc 293
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 434 ttcttaggcacaagttcttttcagagtagtcaattaaataagactgtgaggaccccagcc 493
Query: 294 aatggggaattggaaatggtcaccaccttctttagaataaaaaccaagagcaccctcgcc 353
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 494 aatggggaattggaaatggtcaccaccttctttagaataaaaaccaagagcaccctcgcc 553
Query: 354 agcacaccttcttggtcaaaagtatgtttgctatgtccaggcacaacaattgaaatgatc 413
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 554 agcacaccttcttggtcaaaagtatgtttgctatgtccaggcacaacaattaaaatgatc 613
Query: 414 aactctttctttgctaccccaaacttactttaactcctgtcgtgttttctacaattacac 473
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 614 aactctttctttgctaccccaaacttactttaactcctgtcgtgttttctacaattacac 673
Query: 474 agactgccttctggattatataaacaatgtggatacaacatcccgcgtattccaaatgtt 533
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 674 agactgccttctggattatataaacaatgtggatacaacatcccgcgtattccaaatgtt 733
Query: 534 atgttaaatttccctcattatttaatggatttctcaggccagcccag 580
|||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 734 atgttaaatttccctcattatttaatggatttctcaggccagcccag 780
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 580
Length of database: 980
Length adjustment: 10
Effective length of query: 570
Effective length of database: 970
Effective search space: 552900
Effective search space used: 552900
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
