NTTTTNNNTTCTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTTTCGAG
GATCCGCGGAATTCCACGATATATCATTTATCTAGAAACAAATGGCATGT
TTTGTAAAAACAAGCTTTGGGGGCTTGGAGAATTTATCAATATTGTATTT
TAAATGAAGAATGGTTTATAGGGCTGGAGAGATGGCTCAGTGGTTAAGAG
CACTAACTGCTCTTCTCGAAGTTCTGAGTTCAAGGCTACTTGTCACTCAG
TGCTGTGCCCAGTTTTTAATACTGGGTATCAGAAAATCAAACTCAGGCCC
TTATGTGCACACAGCAAGCGTTCTTTTCCTCTGAGTTGTTGTCACAATCT
ATACCTTTAAAATATTTTAATCTCCCTTTAAATTTTAATATATTTATCTC
CATATTTCTAATTAGTCTACCTTTGGTACCTCTAGAGTAAGGAAATAGAG
ATATACTGAAAGAGAAATACAGTGAACTTACAACTCCAACATCAAATATA
TGTCCAGGAAGGTGGTTAATGAGTTATTCAATACAATGAAATTCCCTATA
GAAGTAAGAATACAGCTTCCCTAGCNAATAGAACATACTGAGTAGGATAA
AACAGGGNCATATTCAATATTCAATGAAACAAAACTTTAAATCTCAAAAA
AAAAAAGGCTCCATGCTTTGCATGGAGGGGCATGCTTTTAAACCTACCCC
TTGTGAAGCCAAAAGAGGCCAATCCTGGTTATTCAAACCCTCCCCTTCTG
TCTATAGGGGTCGCGTAACACAAG

CCGATGCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXTTCAGAAACTCATCATTCTATGCTAGCTTACTGTGGAG
GTGTTGTTGCCAGCTGCTCTCTGCGGCTGTCACCAAGCATTCTCTGCCAT
GCGTACTGTACTGTGAAACAAGATGGTGTTCTACTTAGCTCAAATTACCT
AAATTACTTTGACCTATGAGCATGGCAGTGGAGGATTGTGTTGATTATTT
AATTGATGTGGGAGTGTTTCANNCCACTGTGNNTGNCATCTTCTCCACCT
CCGTATGTCCGGGCCCCATTAGAATACATTTAAAGCGNGGAACGAGAGAA
GGGGCNAATTTTTTTCCTCCCCTCCTGATCCTTCCGGACGTCTTTGGGTA
TGAGTGATCTCCACACCCCCCCCCTTTTATATTTTACCTCTTCCCGGATC
CTGCTTCTACTTTTTGCACTCTATTTCCCCCTCCGTTCCCTTGTGATCCC
ACCCGTTTACCCTTATTAATCCTTTCTCCTTTCCCGTCCTTCTTCCATTT
TCTCTTCCTCCCCCTAAGTCCCCCGCCTCTCTTTCTTTTTCATCCCCTTT
TTCCCCTCCTCTTCCTTTCCTTCATTCCTTATCTCCCTAATTTCTTCCTC
TTTCTCTCGATAGGACTCCATTTTTTTTTTTTTCTTTTTCTCTCCCCATT
ATTTTTCAACCCACCTTTACCCTCACACACTCTTCTCACCAATAGCCACT
CCCCCTCTTCCCCCCCTTATCCCTTTCCCTCCCTTCTTTTTCTTTTATTC

Query= MSMg01no458_n24.b1 MSMg01no458_n24.b1 CHROMAT_FILE:
MSMg01no458_n24.b1 PHD_FILE: MSMg01no458_n24.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:31:35 2005
         (469 letters)



>mm_chr6_80493887_80494755
          Length = 869

 Score =  874 bits (452), Expect = 0.0
 Identities = 461/464 (99%)
 Strand = Plus / Minus

                                                                       
Query: 6   gaattccacgatatatcatttatctagaaacaaatggcatgttttgtaaaaacaagcttt 65
           |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 698 gaattccacgatatataatttatctagaaacaaatggcatgttttgtaaaaacaagcttt 639

                                                                       
Query: 66  gggggcttggagaatttatcaatattgtattttaaatgaagaatggtttatagggctgga 125
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 638 gggggcttggagaatttatcaatattgtattttaaatgaagaatggtttatagggctgga 579

                                                                       
Query: 126 gagatggctcagtggttaagagcactaactgctcttctcgaagttctgagttcaaggcta 185
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 578 gagatggctcagtggttaagagcactaactgctcttctcgaagttctgagttcaaggcta 519

                                                                       
Query: 186 cttgtcactcagtgctgtgcccagtttttaatactgggtatcagaaaatcaaactcaggc 245
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 518 cttgtcactcagtgctgtgcccagtttttaatactgggtatcagaaaatcaaactcaggc 459

                                                                       
Query: 246 ccttatgtgcacacagcaagcgttcttttcctctgagttgttgtcacaatctataccttt 305
           ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 458 ccttatgtgcacacagcaagcattcttttcctctgagttgttgtcacaatctataccttt 399

                                                                       
Query: 306 aaaatattttaatctccctttaaattttaatatatttatctccatatttctaattagtct 365
           ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 398 aaaatattttaatctccctttaacttttaatatatttatctccatatttctaattagtct 339

                                                                       
Query: 366 acctttggtacctctagagtaaggaaatagagatatactgaaagagaaatacagtgaact 425
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 338 acctttggtacctctagagtaaggaaatagagatatactgaaagagaaatacagtgaact 279

                                                       
Query: 426 tacaactccaacatcaaatatatgtccaggaaggtggttaatga 469
           ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 278 tacaactccaacatcaaatatatgtccaggaaggtggttaatga 235


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 469
Length of database: 869
Length adjustment: 10
Effective length of query: 459
Effective length of database: 859
Effective search space:   394281
Effective search space used:   394281
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)