Query= MSMg01no459_i12.b1 MSMg01no459_i12.b1 CHROMAT_FILE:
MSMg01no459_i12.b1 PHD_FILE: MSMg01no459_i12.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:32:29 2005
(482 letters)
>mm_chr6_5734723_5735604
Length = 882
Score = 762 bits (394), Expect = 0.0
Identities = 448/478 (93%), Gaps = 19/478 (3%)
Strand = Plus / Plus
Query: 5 gaattcacaatttactcttaatgtcagttaaattacgaacaactataattctgtgaaaga 64
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattcacaacaaactcttaatgtcagttaaattacgaacaactataattctgtgaaaga 264
Query: 65 ataagtcagtttactcactgattcaactatttggtgttaggtaatgtctcataaagaaag 124
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 ataagtcagtttgctcactgattcaactatttggtgttaggtaatgtctcataaagaaag 324
Query: 125 tgtgttcagatgatgtctttcggggattgaaaggtagcttagaagttgaaaagtcacccg 184
|||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 325 tgtgttcagatgatgtctttcggggattgaaaggtagcttaggagttgaa---------- 374
Query: 185 tcaggaacgaagtcacccgtcaggaaccaagtaccgggctttagtttttgttttcatttt 244
|||||||||||||||||||||||||| ||||||||||| ||||||||||||
Sbjct: 375 ---------aagtcacccgtcaggaaccaagtaccaggctttagtttatgttttcatttt 425
Query: 245 cccttagaggacaggagttagctatagtcacacatgacatgttctccatggaatgctttc 304
||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 426 cccttagagaacaggagttagctatagtcacacacgacatgttctccatggaatgctttc 485
Query: 305 gtagctcactctcaagctcagaacacctgactgtgtactttttcagcttcaagtacaggt 364
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 486 gtaactcactctcaagctcagaacacctgactgtgtactttttcagcttcaagtacaggt 545
Query: 365 taagcaacatgagatcagccatagcaggagtatctacacagaaactgagaaagactgtca 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 546 taagcaacatgagatcagccatagcaggagtatctacacagaaactgagaaagactgtca 605
Query: 425 tagaggacatggcttcccctgccttcaggctgacatgacaccattgcgcaacataaga 482
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 606 tagaggacatggcttcccctgccttcaggctgacatgacaccattgcacaacataaga 663
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 482
Length of database: 882
Length adjustment: 10
Effective length of query: 472
Effective length of database: 872
Effective search space: 411584
Effective search space used: 411584
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no459_i12.g1 MSMg01no459_i12.g1 CHROMAT_FILE:
MSMg01no459_i12.g1 PHD_FILE: MSMg01no459_i12.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:32:29 2005
(333 letters)
>mm_chr6_5904082_5904814
Length = 733
Score = 629 bits (325), Expect = 0.0
Identities = 331/333 (99%)
Strand = Plus / Minus
Query: 1 caggtgcttgtaggacatgtccttataggaagacaggaagttaaacctgtcaattggcca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 607 caggtgcttgtaggacatgtccttataggaagacaggaagttaaacctgtcaattggcca 548
Query: 61 ccaggctaagtgactacctgaaggatggcagatcataagaggtagggattgtaaggctac 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 547 ccaggctaagtgactacctgaaggatggcagatcataagaggtagggattgtaaggctac 488
Query: 121 atgttccatgatatgcaggcccagagcaaggagggaacagttctaactcctgctgacaat 180
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 487 atgttccatgatatgcgggcccagagcaaggagggaacagttctaactcctgctgacaat 428
Query: 181 ctcaggatgagattttcggtgtctggacacatctcgaccttactcttgttcgcagggtgc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 427 ctcaggatgagattttcggtgtctggacacatctcgaccttactcttgttcgcagggtgc 368
Query: 241 cccagtatttccaatatgccctgaacgtctggaagtttcttggatagcagctgttccata 300
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 367 cccagtagttccaatatgccctgaacgtctggaagtttcttggatagcagctgttccata 308
Query: 301 gttcatgatggatgattagaaacattggtctgg 333
|||||||||||||||||||||||||||||||||
Sbjct: 307 gttcatgatggatgattagaaacattggtctgg 275
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 333
Length of database: 733
Length adjustment: 9
Effective length of query: 324
Effective length of database: 724
Effective search space: 234576
Effective search space used: 234576
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
