Query= MSMg01no459_o15.b1 MSMg01no459_o15.b1 CHROMAT_FILE:
MSMg01no459_o15.b1 PHD_FILE: MSMg01no459_o15.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:33:00 2005
(363 letters)
>mm_chr6_54015521_54016277
Length = 757
Score = 636 bits (329), Expect = 0.0
Identities = 352/363 (96%), Gaps = 6/363 (1%)
Strand = Plus / Plus
Query: 1 ttcacctcccactgcttcagtcttactttctgctcatagccttctcatcccatcctaggg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ttcacctcccactgcttcagtcttactttctgctcatagccttctcatcccatcctaggg 260
Query: 61 gcctcctacccatttacctgggttctccaatgaaactgttatctaattactggtccctcc 120
| ||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 261 ggctcctacccatctacctgggttctccaatgaaactattatctaattactggtccctcc 320
Query: 121 caccctacccacccccattaatcacaattcatattctatattagatcaatgtattgagct 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 caccctacccacccccattaatcacaattcatattctatattagatcaatgtattgagct 380
Query: 181 acagaatttgacatacatgaaaaagtggtaaatccttaacacttttgtcactagattctt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 acagaatttgacatacatgaaaaagtggtaaatccttaacacttttgtcactagattctt 440
Query: 241 tcatgcatgctgtctttgagattcattcacacattgtgctgtaggacgttctaatttcta 300
|||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||||
Sbjct: 441 tcatgcatgctgtctttgagattcattcccacattgtgctgtaggacattctaatttcta 500
Query: 301 cacatttatctctgtctctttagtctttagactgttgggttgtttgcaatttgagattag 360
||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 cacatttatctct------ttagtctttagactgttgggttgtttgcaatttgagattag 554
Query: 361 tat 363
|||
Sbjct: 555 tat 557
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 363
Length of database: 757
Length adjustment: 9
Effective length of query: 354
Effective length of database: 748
Effective search space: 264792
Effective search space used: 264792
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no459_o15.g1 MSMg01no459_o15.g1 CHROMAT_FILE:
MSMg01no459_o15.g1 PHD_FILE: MSMg01no459_o15.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:33:01 2005
(322 letters)
>mm_chr6_54247270_54247990
Length = 721
Score = 601 bits (311), Expect = e-176
Identities = 320/323 (99%), Gaps = 3/323 (0%)
Strand = Plus / Minus
Query: 1 ttaactctggtggtatatgcagtttgtgttgccctcctgagcgaggccctgatctgttga 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 521 ttaactctggtggtatatgcagtttgtgttgccctcctgagcgaggccctgatctgttga 462
Query: 61 atcaaagctctactttcctctgtctcatgtggtagtgtgcccttgaagttgtcaaatgac 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 461 atcaaagctctactttcctctgtctcatgtggtagtgtgcccttgaagttgtcaaatgac 402
Query: 121 tctttctctaccaggcctctgtatcaaataca-tttttttttcagtgcaagcacattggc 179
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 401 tctttctctaccaggcctctgtatcaaatacattttttttttcagtgcaagcacattggc 342
Query: 180 agatgggccaatcaacaatgccataaataaaggcatttccacaaaggtactgcaagggtt 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 341 agatgggccaatcaacaatgccataaataaaggcatttccacaaaggtactgcaagggtt 282
Query: 240 aacttcatatgtctaacctttggtaagaagcagatactaggcacattaacaatggcagga 299
||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 281 aacttcatatg-c-aacctttggtaagaagcagatactaggcacattaacaatggcagga 224
Query: 300 agagtgtgtggactttgggccac 322
|||||||||||||||||||||||
Sbjct: 223 agagtgtgtggactttgggccac 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 322
Length of database: 721
Length adjustment: 9
Effective length of query: 313
Effective length of database: 712
Effective search space: 222856
Effective search space used: 222856
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
