Query= MSMg01no460_p17.b1 MSMg01no460_p17.b1 CHROMAT_FILE:
MSMg01no460_p17.b1 PHD_FILE: MSMg01no460_p17.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:34:24 2005
(455 letters)
>mm_chr6_47226237_47227093
Length = 857
Score = 764 bits (395), Expect = 0.0
Identities = 430/447 (96%), Gaps = 11/447 (2%)
Strand = Plus / Minus
Query: 1 caccttccaaaggcaggttttctgaggttgaggtatcacatactatatgaattatgccaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 438 caccttccaaaggcaggttttctgaggttgaggtatcacatactatatgaattgtgccaa 379
Query: 61 gggtatctgctgcatgcactcaagtcctgtgagagtgtagaagcccattgtcatccttct 120
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 378 gggtatctgctgcatgcactcaagtcctgtgagagtgtagaagtccattgtcatccttct 319
Query: 121 gaccaaagacctatagggaatgaggctttgcacctgtctgttgaaatgatcttctgaaag 180
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 318 gaccaaagacctatagggaatgaggctttgcacctgtctgttgaaatgatcttttgaaag 259
Query: 181 aaatgcctttggtccaattcat--tgtgtcaaatatcatgaatgagaccaaactccccaa 238
||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 258 aaacgcctttggtccaattcattgtgtgtcaaatatcatgaatgagaccaaactcccc-- 201
Query: 239 ggcttcacaggaatggccacaagcaacctggcatgcagttcggagtggttccttagcaca 298
| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 200 -g------aggaatggccacaagcaacctggcatgcagttcggagtggttccttagcaca 148
Query: 299 gaaatgggcgctagctgacttttggactcaggctttctgctgtttgttttgcttttatgt 358
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 147 gaaatgggcgctagctgacttttggactcaggctttctgctgtttgttttgcttttgtgt 88
Query: 359 tttacagactgtgcgagaccatctgtagccatctcttgctggcatgtcgtcctcattcca 418
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 87 tttacagactgtgcgagaccatctgtagccatctcttgctggcatgtcttcctcattcca 28
Query: 419 aggaagtaagattctgaatgtgacaga 445
|||||||||||||||||||||||||||
Sbjct: 27 aggaagtaagattctgaatgtgacaga 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 455
Length of database: 857
Length adjustment: 10
Effective length of query: 445
Effective length of database: 847
Effective search space: 376915
Effective search space used: 376915
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no460_p17.g1 MSMg01no460_p17.g1 CHROMAT_FILE:
MSMg01no460_p17.g1 PHD_FILE: MSMg01no460_p17.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:34:24 2005
(196 letters)
>mm_chr6_47022328_47022923
Length = 596
Score = 340 bits (176), Expect = 2e-98
Identities = 191/196 (97%)
Strand = Plus / Plus
Query: 1 agtttggaagcaagcaaacggcttctattatgtgttttaagcattatgtaaccgctgatc 60
|||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||
Sbjct: 201 agtttggaagcaagcaaagggcttctattatgtgttttaagcattatgtaactgctgatc 260
Query: 61 ctttacctatgaatgtgaaagcatccactgaaactcatactgcgttcaaatgatccctgg 120
|||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||
Sbjct: 261 ctttacctatgaatgtgaaagcatccactgaaactcataccgcgttcaaatgattcctgg 320
Query: 121 aaaagtaaatgatagaataatgcatgtataacagaataatagaataaagttacaattcta 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 aaaagtaaatgatagaataatgcatgtataacagaataatagaataaagttacaattcta 380
Query: 181 acttcctctcaaagcc 196
||||| ||||||||||
Sbjct: 381 acttcttctcaaagcc 396
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 6
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 196
Length of database: 596
Length adjustment: 8
Effective length of query: 188
Effective length of database: 588
Effective search space: 110544
Effective search space used: 110544
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
