Query= MSMg01no461_d19.b1 MSMg01no461_d19.b1 CHROMAT_FILE:
MSMg01no461_d19.b1 PHD_FILE: MSMg01no461_d19.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:34:45 2005
(454 letters)
>mm_chr6_127149973_127150825
Length = 853
Score = 855 bits (442), Expect = 0.0
Identities = 451/454 (99%), Gaps = 1/454 (0%)
Strand = Plus / Plus
Query: 1 cggggcaatcccatatcaaaacaaatatagactaaaccctgcattcttagtctccgagat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 cggggcaatcccatatcaaaacaaatatagactaaaccctgcattcttagtctccgagat 260
Query: 61 gttagttttctctccgtgaaataggaattgctctgaaggctttccttttggctcgaaggg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gttagttttctctccgtgaaataggaattgctctgaaggctttccttttggctcgaaggg 320
Query: 121 acctggacttcaaggagatagggaggtgtgagcctttgagcacctcttcctctgttatca 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 acctggacttcaaggagatagggaggtgtgagcctttgagcacctcttcctctgttatca 380
Query: 181 aagcatctttcgccccaggctcttgaaacctctttaaagcagcatcatattttcatcaac 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 aagcatctttcgccccaggctcttgaaacctctttaaagcagcatcatattttcatcaac 440
Query: 241 taaaaattgtctctagagagacgttgtcattacgcgccctcggtgggaagctggcatcca 300
||||||||| | | ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 taaaaattgcc-caagagagacgttgtcattacgcgccctcggtgggaagctggcatcca 499
Query: 301 tccccacattcctctatgatcacagagtcttgtaggtccaaagagaccacaaagggcatc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 500 tccccacattcctctatgatcacagagtcttgtaggtccaaagagaccacaaagggcatc 559
Query: 361 attcttttgcctatctgcggcagtgtctggtagaaatcgaaggcatctcaggggcctcct 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 560 attcttttgcctatctgcggcagtgtctggtagaaatcgaaggcatctcaggggcctcct 619
Query: 421 ccctctgctcgggcccaggcaggctccctaagtg 454
||||||||||||||||||||||||||||||||||
Sbjct: 620 ccctctgctcgggcccaggcaggctccctaagtg 653
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 454
Length of database: 853
Length adjustment: 10
Effective length of query: 444
Effective length of database: 843
Effective search space: 374292
Effective search space used: 374292
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no461_d19.g1 MSMg01no461_d19.g1 CHROMAT_FILE:
MSMg01no461_d19.g1 PHD_FILE: MSMg01no461_d19.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:34:45 2005
(423 letters)
>mm_chr6_127399439_127400261
Length = 823
Score = 787 bits (407), Expect = 0.0
Identities = 420/425 (98%), Gaps = 3/425 (0%)
Strand = Plus / Minus
Query: 1 tcttttaaaaacatcaaaatgcaatccccacagattttaattaggaaacatgacaaggaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 tcttttaaaaacatcaaaatgcaatccccacagattttaattaggaaacatgacaaggaa 506
Query: 61 ttaaattcgacctttaagagaaaaaaaaaatgaagtgctaagtaactccccacactcact 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 ttaaattcgacctttaagagaaaaaaaaaatgaagtgctaagtaactccccacactcact 446
Query: 121 ggaaggactctattgaaaataccagcgattattagctttagctgctgggggaaattatct 180
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 ggaaggactctattgaaaataccagcgattattagctttagctgctgggggaaattatcc 386
Query: 181 gagcacaaagatgggcatcagcattcagctcacagcatcaggcaaaagcagcagctgaga 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 gagcacaaagatgggcatcagcattcagctcacagcatcaggcaaaagcagcagctgaga 326
Query: 241 tgtgtgtctatcctaattagaggatgcagggtctgaaaaggccctggagccgctgcagct 300
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 tgtgtgtctatcctaattagaggatgcagggtctgaaaaggccctggagccgctgcagcc 266
Query: 301 acattcctggctggggctttccttccaggaatgccacattcaggttttggtcatcaccat 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 acattcctggctggggctttccttccaggaatgccacattcaggttttggtcatcaccat 206
Query: 361 gtccatttttttt--ctttttttctttctttttttttttttacttaaaaggaaagactag 418
||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 205 gtccattttttttttctttttttctttctttttttttttt-acttaaaaggaaagactag 147
Query: 419 gacta 423
|||||
Sbjct: 146 gacta 142
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 423
Length of database: 823
Length adjustment: 9
Effective length of query: 414
Effective length of database: 814
Effective search space: 336996
Effective search space used: 336996
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
