Query= MSMg01no461_o12.b1 MSMg01no461_o12.b1 CHROMAT_FILE:
MSMg01no461_o12.b1 PHD_FILE: MSMg01no461_o12.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:35:41 2005
(213 letters)
>mm_chr6_25235802_25236414
Length = 613
Score = 391 bits (202), Expect = e-113
Identities = 211/216 (97%), Gaps = 4/216 (1%)
Strand = Plus / Plus
Query: 1 aagaaaaacatttgtagtaaagggtcagtactataggccttcaatctggtgagctttgta 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 aagaaaaacatttgtagtaaagggtcagtactataggccttcaatctggtgagctttgta 260
Query: 61 tttctttgtggactgaccatgacagacaatgctgttcacttcttcacaggggaagtgtca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tttctttgtggactgaccatgacagacaatgctgttcacttcttcacaggggaagtgtca 320
Query: 121 gtttgctatattgcataagcaaacatgtaaattaagcaggcagtgcaaaaaacaaacaaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gtttgctatattgcataagcaaacatgtaaattaagcaggcagtgcaaaaaacaaacaaa 380
Query: 181 caaacaaacaaacaaacaaa----acccaaaacaaa 212
|||||||||||||||||||| ||| ||||||||
Sbjct: 381 caaacaaacaaacaaacaaacaaaaccaaaaacaaa 416
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 213
Length of database: 613
Length adjustment: 9
Effective length of query: 204
Effective length of database: 604
Effective search space: 123216
Effective search space used: 123216
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no461_o12.g1 MSMg01no461_o12.g1 CHROMAT_FILE:
MSMg01no461_o12.g1 PHD_FILE: MSMg01no461_o12.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:35:41 2005
(554 letters)
>mm_chr6_25469239_25470192
Length = 954
Score = 563 bits (291), Expect = e-164
Identities = 300/303 (99%), Gaps = 1/303 (0%)
Strand = Plus / Minus
Query: 252 tttcatgttgtttcctggcaagttttgtatttatcatagactcatttttcttaaagtata 311
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 954 tttcatgttgtttcctggcaagttttgtatttatcatagactcatttttcttaaagtata 895
Query: 312 attcaactccagtattttatttttttaaaaatcttctgtgtatataatctgcccattgtt 371
|||||||||||||| |||| ||||| ||||||||||||||||||||||||||||||||||
Sbjct: 894 attcaactccagtacttta-tttttaaaaaatcttctgtgtatataatctgcccattgtt 836
Query: 372 gaaagtaaggtagggagctctttgctattacaggactggactcggtctcttgcttctgat 431
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 835 gaaagtaaggtagggagctctttgctattacaggactggactcggtctcttgcttctgat 776
Query: 432 catgtaataatagatatattttacaatgtgtggttatatcttctgataacacacaagata 491
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 775 catgtaataatagatatattttacaatgtgtggttatatcttctgataacacacaagata 716
Query: 492 ctgaattttcaatccttttaattcatttagaaacaataaccttgctacttgctctttatt 551
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 715 ctgaattttcaatccttttaattcatttagaaacaataaccttgctacttgctctttatt 656
Query: 552 cag 554
|||
Sbjct: 655 cag 653
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 554
Length of database: 954
Length adjustment: 10
Effective length of query: 544
Effective length of database: 944
Effective search space: 513536
Effective search space used: 513536
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
