Query= MSMg01no462_g06.b1 MSMg01no462_g06.b1 CHROMAT_FILE:
MSMg01no462_g06.b1 PHD_FILE: MSMg01no462_g06.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:36:23 2005
(379 letters)
>mm_chr6_89259367_89260145
Length = 779
Score = 629 bits (325), Expect = 0.0
Identities = 364/379 (96%), Gaps = 4/379 (1%)
Strand = Plus / Minus
Query: 1 aacaatctttccccgtcacggcacactgctattgctttgtttatcttgctggcctgtgag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 724 aacaatctttccccgtcacggcacactgctattgctttgtttatcttgctggcctgtgag 665
Query: 61 gacagatagactggtctgtctccatcccacattaggatggtatgtggcacacactcagtg 120
||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 664 gacaggtagactggtctgtctccatcccacattaggatggtatgtggcaca----cagtg 609
Query: 121 ctcatcacgtgtttgctgagtggatgaatgaccacatgctagtcttggcacacatgcatt 180
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 608 ctcatcacgtgtttgctgagtggatgaatgaccacatgctagtcttggcacacatgcagt 549
Query: 181 ctgtacatctctgtggactgtgttccatttgtgactaggcaagtgcaccaggctgtcacc 240
|||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||
Sbjct: 548 ctgtacatctctgtggaccgtgtcccatttgtgactaggcaagtgcaccaggctgtcacc 489
Query: 241 catctctttttttcttgacttttccaataggtcccagggccctgccagttcctactatga 300
|||||| || ||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 488 catctcccttgaacttgacttttccaataggtcccagggccctgccaggccctactatga 429
Query: 301 tgggctgttgtattgatcaatttattgtccttgcgaccaaatatctcagggaaataactt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 428 tgggctgttgtattgatcaatttattgtccttgcgaccaaatatctcagggaaataactt 369
Query: 361 aaatatggagaaggacatt 379
|||||||||||||||||||
Sbjct: 368 aaatatggagaaggacatt 350
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 379
Length of database: 779
Length adjustment: 9
Effective length of query: 370
Effective length of database: 770
Effective search space: 284900
Effective search space used: 284900
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no462_g06.g1 MSMg01no462_g06.g1 CHROMAT_FILE:
MSMg01no462_g06.g1 PHD_FILE: MSMg01no462_g06.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:36:23 2005
(249 letters)
>mm_chr6_89119517_89120165
Length = 649
Score = 476 bits (246), Expect = e-139
Identities = 246/246 (100%)
Strand = Plus / Plus
Query: 1 caggaaagccgtggctatgtagaaacactctgtttcaaaacaaacagacaataaatcaaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 caggaaagccgtggctatgtagaaacactctgtttcaaaacaaacagacaataaatcaaa 260
Query: 61 cctgcaaggtgcatttaaatggtgttgtgtgacccgtcttgttgacttgggcttcctaac 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 cctgcaaggtgcatttaaatggtgttgtgtgacccgtcttgttgacttgggcttcctaac 320
Query: 121 actatgctggtgatgtttctacaccaaagtctggttctgtttttcaggaggtgttgcctt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 actatgctggtgatgtttctacaccaaagtctggttctgtttttcaggaggtgttgcctt 380
Query: 181 gaacctacctagatctagaagttgtgtctatggctgtctgccacaagaagactgctgtgg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 gaacctacctagatctagaagttgtgtctatggctgtctgccacaagaagactgctgtgg 440
Query: 241 ccactg 246
||||||
Sbjct: 441 ccactg 446
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 249
Length of database: 649
Length adjustment: 9
Effective length of query: 240
Effective length of database: 640
Effective search space: 153600
Effective search space used: 153600
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
