Query= MSMg01no462_i03.b1 MSMg01no462_i03.b1 CHROMAT_FILE:
MSMg01no462_i03.b1 PHD_FILE: MSMg01no462_i03.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:36:33 2005
(453 letters)
>mm_chr6_30624395_30625248
Length = 854
Score = 818 bits (423), Expect = 0.0
Identities = 446/456 (97%), Gaps = 5/456 (1%)
Strand = Plus / Minus
Query: 1 attcctgccttat---cctctcaccctctctagattactgctgctcacaagcattagctt 57
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 654 attcctgccttataaa--tctcaccctctctagattactgctgctcacaagcattagctt 597
Query: 58 ttgttacatgctcagtacaaataacattattaaattataggaacccaatggggaaaaact 117
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 596 ttgttacatgctcagtacaaataacattattaaattataggaacccaatggggaaaaact 537
Query: 118 caaagccctgagtcactcggtggatcgattgtgctccggctttgcctaggcctactgatg 177
||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||
Sbjct: 536 caaagccctgagtcactcggtggatcgattgtgctccggctttgcatagggctactgatg 477
Query: 178 gacttgtttctttctcttgattcaaattggggagctcttgttagatatctttcattgcaa 237
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 476 gacttgtttctttctcttgattcaaattggggagctcttgttagatatctttcattgcaa 417
Query: 238 cttcagtggtaaacaaggcagaaaccaaataccaccttaggcatttctaggctacctgag 297
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 416 cttcagtggtaaacaaggcagaaaccaaataccaccttaggcatttctaggctacctgag 357
Query: 298 tcggtggcttattcgtgtaccctgtaatataatcgtgtatcaatcaagttgtacctcatc 357
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 356 tcggtggcttatacgtgtaccctgtaatataatcgtgtatcaatcaagttgtacctcatc 297
Query: 358 atttaaagaaagtcagaaaataaggtgtgtgaaacacaagccaaatccgaatgggatcat 417
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 296 atttaaagaaagtcagaaaatagggtgtgtgaaacacaagccaaatccgaatgggatcat 237
Query: 418 ttacattataaaataacttaccctaangacttttaa 453
|||||||||||||||||||||||||| |||||||||
Sbjct: 236 ttacattataaaataacttaccctaaggacttttaa 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 453
Length of database: 854
Length adjustment: 10
Effective length of query: 443
Effective length of database: 844
Effective search space: 373892
Effective search space used: 373892
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no462_i03.g1 MSMg01no462_i03.g1 CHROMAT_FILE:
MSMg01no462_i03.g1 PHD_FILE: MSMg01no462_i03.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:36:33 2005
(453 letters)
>mm_chr6_30477168_30478020
Length = 853
Score = 853 bits (441), Expect = 0.0
Identities = 450/453 (99%)
Strand = Plus / Plus
Query: 1 accatttcaccatctgcctgcctctcagccccctgtactgtactgggattgcaggagtat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 accatttcaccatctgcctgcctctcagccccctgtactgtactgggattgcaggagtat 260
Query: 61 gccactgtttttggcacctgcatttggatggcttgcaggcaaggtaatttcttatttttt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gccactgtttttggcacctgcatttggatggcttgcaggcaaggtaatttcttatttttt 320
Query: 121 ttaagacttgttcttactgggtagccctaactggcctgaaattctccatgtgaaccagcc 180
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ttaagacttgttctttctgggtagccctaactggcctgaaattctccatgtgaaccagcc 380
Query: 181 tggcctcaaactcacagagatccgctcatgcagtgctgagattaaaggcataccccacca 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tggcctcaaactcacagagatccgctcatgcagtgctgagattaaaggcataccccacca 440
Query: 241 acatatttatttttaaaaaaattaccctgactgggtgtggtagtgcacacttttaatcct 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 acatatttatttttaaaaaaattaccctgactgggtgtggtagtgcacacttttaatcct 500
Query: 301 accacctggggaggcagaggcaggttgatagacattccaggccagcatggtcttcatttg 360
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 501 accacctggggaggcagaggcaggttgatagaaattccaggccagcatggtcttcatttg 560
Query: 361 gaattccaggccaattaaggctataaagtgaggcttagtctgaacaaacaaacaaacccc 420
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 gaattccaggccaattaagtctataaagtgaggcttagtctgaacaaacaaacaaacccc 620
Query: 421 taaattatgcctatttgtataggtttttgtttt 453
|||||||||||||||||||||||||||||||||
Sbjct: 621 taaattatgcctatttgtataggtttttgtttt 653
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 453
Length of database: 853
Length adjustment: 10
Effective length of query: 443
Effective length of database: 843
Effective search space: 373449
Effective search space used: 373449
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
