Query= MSMg01no463_d04.b1 MSMg01no463_d04.b1 CHROMAT_FILE:
MSMg01no463_d04.b1 PHD_FILE: MSMg01no463_d04.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:37:30 2005
(498 letters)
>mm_chr6_35075736_35076627
Length = 892
Score = 895 bits (463), Expect = 0.0
Identities = 485/495 (97%), Gaps = 6/495 (1%)
Strand = Plus / Plus
Query: 4 gaattccaacaccttttctggccttcagaggcacctatacacacttagcacatacacata 63
||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 204 gaattccaacaccctctctggccttcagaggcacctatacacacttagcacatacacata 263
Query: 64 tatacataaaaatagatctttaaaaaaattaccaccaaatcctgcagaatttccacctca 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 tatacataaaaatagatctttaaaaaaattaccaccaaatcctgcagaatttccacctca 323
Query: 124 atgctttaatattcctcagaatagcttttcaactggtctttaatatttaaaaaaaacaaa 183
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 324 atgctttaatattcctcagaatagcttttcaactggtctttaatatttaaaaaaaa-aaa 382
Query: 184 tggctgttaactccaaacacagtattgtgctgtgttatttagcacagtactgaaagaatt 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 383 tggctgttaactccaaacacagtattgtgctgtgttatttagcacagtactgaaagaatt 442
Query: 244 aatctttctaaaacataccaatatgtaactcccgatccttaccaagttttttttgggggg 303
||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||
Sbjct: 443 aatctttctaaaacataccaatatgtaactcccgacccttaccaagttttttttgcgggg 502
Query: 304 tgagagtgaggggcttcttaactgcttcacacattgaattcaagcttattctaaacatat 363
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 503 tgagagtgaggggcttcttaactgcttcacacattgaattcaagcttattctaaacatat 562
Query: 364 actccataaaccaaccttactttacttataaaacgatctgctacaattccctcaggttaa 423
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 563 actccataaaccaaccttactt-----ataaaacgatctgctacaattccctcaggttaa 617
Query: 424 catgttcttccacaaaaccagacttcttacatctcctcagaacatgctgatccccatctc 483
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 618 catgttcttccacaaaaccagacttcttacatctcctcagaacatgctgatccccatctc 677
Query: 484 caagtgtctcctcgt 498
|||||||||||||||
Sbjct: 678 caagtgtctcctcgt 692
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 498
Length of database: 892
Length adjustment: 10
Effective length of query: 488
Effective length of database: 882
Effective search space: 430416
Effective search space used: 430416
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no463_d04.g1 MSMg01no463_d04.g1 CHROMAT_FILE:
MSMg01no463_d04.g1 PHD_FILE: MSMg01no463_d04.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:37:30 2005
(420 letters)
>mm_chr6_35220269_35221088
Length = 820
Score = 789 bits (408), Expect = 0.0
Identities = 417/420 (99%)
Strand = Plus / Minus
Query: 1 tctaggcataccagcttgggcttgaactcagagatatacctgcctctgtttcccagtact 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 722 tctaggcataccagcttgggcttgaactcagagatatacctgcctctgtttcccagtact 663
Query: 61 gggaggagtacaggaatgaaagataactgggccaccacgccctttgagaccttgtcttaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 662 gggaggagtacaggaatgaaagataactgggccaccacgccctttgagaccttgtcttaa 603
Query: 121 aacactgcaatattgaaagccatgggttcaaatcccaaagagagcaattaagctatcttc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 602 aacactgcaatattgaaagccatgggttcaaatcccaaagagagcaattaagctatcttc 543
Query: 181 tagggctgggtgggtccctcagatctctaccccaaggatgagggattcttgcttcaatta 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 542 tagggctgggtgggtccctcagatctctaccccaaggatgagggattcttgcttcaatta 483
Query: 241 gagccacttattcatgagattttattttttaaaagaagggatttctcagctaaagagtta 300
|||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 482 gagccacttactcatgagattttattttttaaaagaagggattcctcagctaaagagtta 423
Query: 301 aaacttcaagaatcacttcattaagatgccccctcctcctcaaagctcaaacatccatcc 360
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 422 aaacttcaagaaccacttcattaagatgccccctcctcctcaaagctcaaacatccatcc 363
Query: 361 ttggaacggcctcagagtttcagcccttgtgggctgccaaaagcattgtgtgccccagag 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 362 ttggaacggcctcagagtttcagcccttgtgggctgccaaaagcattgtgtgccccagag 303
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 420
Length of database: 820
Length adjustment: 9
Effective length of query: 411
Effective length of database: 811
Effective search space: 333321
Effective search space used: 333321
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
