Query= MSMg01no463_e01.b1 MSMg01no463_e01.b1 CHROMAT_FILE:
MSMg01no463_e01.b1 PHD_FILE: MSMg01no463_e01.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:37:35 2005
(244 letters)
>mm_chr6_31928944_31929588
Length = 645
Score = 458 bits (237), Expect = e-133
Identities = 243/245 (99%), Gaps = 1/245 (0%)
Strand = Plus / Plus
Query: 1 agtacctaaccagtccaatgtgaatatatccaggttgctctaggaaaaaaaaa-tcacag 59
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 201 agtacctaaccagtccaatgtgaatatatccaggttgctctaggaaaaaaaaaatcacag 260
Query: 60 aacacagtcaccaggtcacatatgctataaggatatgctcagtggccggccctaactagc 119
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 261 aacacagtcaccaggtcacatatgctataaggatatgctcagtggccggccctacctagc 320
Query: 120 attaactatgttatgttcacctcgttttctctctcctttaactccttgtggtgccacctc 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 attaactatgttatgttcacctcgttttctctctcctttaactccttgtggtgccacctc 380
Query: 180 tccaacattccctcctatttgtgttttgtattattactctgtcaccaggaccaactgctg 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tccaacattccctcctatttgtgttttgtattattactctgtcaccaggaccaactgctg 440
Query: 240 agtca 244
|||||
Sbjct: 441 agtca 445
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 244
Length of database: 645
Length adjustment: 9
Effective length of query: 235
Effective length of database: 636
Effective search space: 149460
Effective search space used: 149460
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no463_e01.g1 MSMg01no463_e01.g1 CHROMAT_FILE:
MSMg01no463_e01.g1 PHD_FILE: MSMg01no463_e01.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:37:35 2005
(217 letters)
>mm_chr6_32130646_32131262
Length = 617
Score = 381 bits (197), Expect = e-110
Identities = 212/217 (97%)
Strand = Plus / Minus
Query: 1 agtggactttggctgaccactcatttagttgggaacatctggaatgggagagagatggga 60
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 417 agtggactttggctgaccactcattcagttgggaacatctggaatgggagagagatggga 358
Query: 61 gatgattttgcttaaggacggcagggtggtagggaagggtgttcctacatgtgaaggact 120
|||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||
Sbjct: 357 gatgattttgcttaaggatggcaggatggtagggaagggtgttcctacatgtgaaggact 298
Query: 121 ccatccagtgaggatgcaggaagacagtcctgtaccaggacagacagagcaatggagact 180
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 297 ccatccagtgaggatgcaggaagacagtcctgcaccaggacagacagagcaatggagact 238
Query: 181 tccactgagcaaatcaatgcagaagtgggagctgtgg 217
||||||||||||||||||||||||||||||||||||
Sbjct: 237 cccactgagcaaatcaatgcagaagtgggagctgtgg 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 9
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 217
Length of database: 617
Length adjustment: 9
Effective length of query: 208
Effective length of database: 608
Effective search space: 126464
Effective search space used: 126464
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
