Query= MSMg01no463_l15.b1 MSMg01no463_l15.b1 CHROMAT_FILE:
MSMg01no463_l15.b1 PHD_FILE: MSMg01no463_l15.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:38:15 2005
(249 letters)
>mm_chr6_90779612_90780264
Length = 653
Score = 424 bits (219), Expect = e-123
Identities = 243/253 (96%), Gaps = 4/253 (1%)
Strand = Plus / Plus
Query: 1 cacccttcctgatgtgaggggaggcccccagagtgaagtgccttgctcatcagggtctgc 60
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 201 cacccttcctgatgtgaggggaggcccccagcgtgaagtgccttgctcatcagggtctgc 260
Query: 61 tcagcaactccaggtagaaagccttctggagccctcattgaacacactca----ctagtc 116
||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||
Sbjct: 261 tcagcaactccaggtagaaagccttctggagccctcactgaacacactcactagctagtc 320
Query: 117 agaacttattggcatgggcagaacttcaaaatagcagtcaataaagagaggctgctccat 176
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 321 agaacttattggcatgggcagaacttcaaaatagcagtcaataaagagaggttgctccat 380
Query: 177 attggtaggttaaacacctaaagttccagctacttgagaagctgtgatgagaagattggc 236
||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 381 attgggaggttaaacacctaaagttccagctactggagaagctgtgatgagaagattggt 440
Query: 237 tgagcctaggaat 249
|||||||||||||
Sbjct: 441 tgagcctaggaat 453
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 9
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 249
Length of database: 653
Length adjustment: 9
Effective length of query: 240
Effective length of database: 644
Effective search space: 154560
Effective search space used: 154560
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no463_l15.g1 MSMg01no463_l15.g1 CHROMAT_FILE:
MSMg01no463_l15.g1 PHD_FILE: MSMg01no463_l15.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:38:15 2005
(466 letters)
>mm_chr6_90946658_90947523
Length = 866
Score = 847 bits (438), Expect = 0.0
Identities = 459/466 (98%)
Strand = Plus / Minus
Query: 1 cagaggtgcctggtgatctcacaggcttcccaatcattccttccctgctctgttcagtct 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 666 cagaggtgcctggtgatctcacaggcttcccaatcattccttccctgctctgttcagtct 607
Query: 61 tttgtctgctgttgagctgctcttggcagcagtgggtgggagctatcagtgcaagattag 120
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 606 tttgtctgctgttgagctgctcttggcagcagtgggtgggagctatgagtgcaagattag 547
Query: 121 tcagcatggcctttgcgcaggaatccagtgcagggagtgggagacaagcacaaagtatcc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 546 tcagcatggcctttgcgcaggaatccagtgcagggagtgggagacaagcacaaagtatcc 487
Query: 181 agcccaggagcaggtcttagtttgaaaaagtgacctgtggacatggaaaacaacgtcggg 240
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 486 agcccaggagcaggtcttagtttgaaaaagtgacctgtggacatggaaaacaacgtcgga 427
Query: 241 actgcctattttgaaggtctagtctatttttattttgttaaaaatgtgaagtagtcagga 300
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 426 actgcctaagctgaaggtctagtctatttttattttgttaaaaatgtgaagtagtcagga 367
Query: 301 agaacgtagactatatttcctccgggttggacatggaccttggccgccttgagtcagagg 360
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 366 agaacgtagactatatttcctccgggttggacatggaccttggccgtcttgagtcagagg 307
Query: 361 tgctgtgatcacccaatgagatccttgggaaactgttagcacccccttctggggggctca 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 306 tgctgtgatcacccaatgagatccttgggaaactgttagcacccccttctggggggctca 247
Query: 421 tgggtcttcaggagattcttacaaagacctcttcctccggacatta 466
|||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 246 tgggtcttcaggagattcttacaaaggcctcttcctccggacatta 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 466
Length of database: 866
Length adjustment: 10
Effective length of query: 456
Effective length of database: 856
Effective search space: 390336
Effective search space used: 390336
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
