Query= MSMg01no463_p10.b1 MSMg01no463_p10.b1 CHROMAT_FILE:
MSMg01no463_p10.b1 PHD_FILE: MSMg01no463_p10.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:38:34 2005
(659 letters)
>mm_chr6_98400478_98401537
Length = 1060
Score = 1193 bits (617), Expect = 0.0
Identities = 635/641 (99%), Gaps = 1/641 (0%)
Strand = Plus / Plus
Query: 20 ggaagaaaatctcttagcttgtatttttcagctagtgttgtgctatttgaaacagcagaa 79
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 220 ggaagaaaatctcttagcttgtatttttcagctagtgttgtgctgtttgaaacagcagaa 279
Query: 80 cacacaaaaaaaaa-tcaagtggacttgactgtttaattacagataaacatagtaccaat 138
|||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 280 cacacaaaaaaaaaatcaagtggacttgactgtttaattacagataaacacagtaccaat 339
Query: 139 tcaagcattgattttacttcacgcgccttcgtgtaataaatgatacactttgccggccat 198
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 340 tcaagcattgattttacttcacgcgccttcgtgtaataaatgatacactttgccagccat 399
Query: 199 cctatagtattctgtataggattttgcatttataaggtcttttaaatatttaattcctta 258
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 400 cctatagtattctgtataggattttgcatttataaggtcttttaaatatttaattcctta 459
Query: 259 agttagctttttattttcatgttttcctacagaaattatcaagtaccctattgaaaactt 318
||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 460 agttagctttttaagttcatgttttcctacagaaattatcaagtaccctattgaaaactt 519
Query: 319 aggacccagacatagtagatcaaactctgtaacatgtaagaatttttggaaaatatgaag 378
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 520 aggacccagacatagtagatcaaactctgtaacatgtaagaatttttggaaaatatgaag 579
Query: 379 ccaggtgtctgaatagtagatgtgtcaaattaagtgtattaattacaatttatggattaa 438
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 580 ccaggtgtctgaatagtagatgtgtcaaattaagtgtattaattacaatttatggattaa 639
Query: 439 tataatagagactgcataatgatatggatatagagtagcactatataatgaaatttaatt 498
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 640 tataatagagactgcataatgatatggatatagagtagcactatataatgaaatttaatt 699
Query: 499 tgtatatgcaagtagtatggaaagtgcagtggaaatttatgtgatttaataagtttgtta 558
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 700 tgtatatgcaagtagtatggaaagtgcagtggaaatttatgtgatttaataagtttgtta 759
Query: 559 ttgaacaatatataaaaattgaacaagacaaaaactaggcttttttagcatctcacataa 618
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 760 ttgaacaatatataaaaattgaacaagacaaaaactaggcttttttagcatctcacataa 819
Query: 619 attatctgaacagttctgattggtacaagtaacacctctgt 659
|||||||||||||||||||||||||||||||||||||||||
Sbjct: 820 attatctgaacagttctgattggtacaagtaacacctctgt 860
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 34
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 659
Length of database: 1060
Length adjustment: 10
Effective length of query: 649
Effective length of database: 1050
Effective search space: 681450
Effective search space used: 681450
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no463_p10.g1 MSMg01no463_p10.g1 CHROMAT_FILE:
MSMg01no463_p10.g1 PHD_FILE: MSMg01no463_p10.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:38:34 2005
(631 letters)
>mm_chr6_98567288_98568318
Length = 1031
Score = 905 bits (468), Expect = 0.0
Identities = 495/504 (98%)
Strand = Plus / Minus
Query: 128 tactgagtctacaactgattctgaacacaataccaattaaataaatgactcctgttttta 187
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 1031 tactgagtctacaactgattctgaacacaataccaattaaataaatgactcccgttttta 972
Query: 188 tctgaaaaagacatttcccaattaaacacaaaaagtccaggcaacacacgcttcttatta 247
||||||||||||||||||||||||||||||||||||||||||||||||||| | | |
Sbjct: 971 tctgaaaaagacatttcccaattaaacacaaaaagtccaggcaacacacgcaacaaacaa 912
Query: 248 ataaacaaacaacaaagcagacaaacaaagaaacaaaaaccaaaacagcaaattggcaag 307
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 911 ataaacaaacaacaaagcagacaaacaaagaaacaaaaaccaaaacagcaaattggcaag 852
Query: 308 tgggattccaccaagctgaaatgtttctgtacagcaatgtaaaatatccataaaatgaaa 367
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 851 tgggattccaccaagctgaaatgtttctgtacagcaatgtaaaatatccataaaatgaaa 792
Query: 368 agataacctgaagtattttcaggacatatttcatgtgtgatgggtgtgacatcacacaac 427
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 791 agataacctgaagtattttcaggacatatttcatgtgtgatgggtgtgacatcacacaac 732
Query: 428 ctgaaacatgcatctcgatctcttatgctaccaagctgtgctccacgattaaagtgatac 487
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 731 ctgaaacatgcacctcgatctcttatgctaccaagctgtgctccacgattaaagtgatac 672
Query: 488 atgtgtgtttaggactgagagccccagatgcacaaacaatttacgttaaaaaatgactct 547
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 671 atgtgtgtttgggactgagagccccagatgcacaaacaatttacgttaaaaaatgactct 612
Query: 548 gatgttcccacagtatgggatactgcttccactggtctctctctctctctttttctctct 607
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 611 gatgttcccacagtatgggatactgcttccactggtctctctctctctctttttctctct 552
Query: 608 ctctgcttataccactagctttat 631
||||||||||||||||||||||||
Sbjct: 551 ctctgcttataccactagctttat 528
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 631
Length of database: 1031
Length adjustment: 10
Effective length of query: 621
Effective length of database: 1021
Effective search space: 634041
Effective search space used: 634041
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
