Query= MSMg01no464_e07.b1 MSMg01no464_e07.b1 CHROMAT_FILE:
MSMg01no464_e07.b1 PHD_FILE: MSMg01no464_e07.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:38:58 2005
(240 letters)
>mm_chr6_91963373_91964011
Length = 639
Score = 426 bits (220), Expect = e-124
Identities = 232/236 (98%), Gaps = 1/236 (0%)
Strand = Plus / Minus
Query: 5 tccttgccccacacacccaggacagaccatgacaatacaaggctgggaaaaccacccatc 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 439 tccttgccccacacacccaggacagaccatgacaatacaaggctgggaaaaccacccatc 380
Query: 65 ccatcgagagcattctggcttgtgatgaaagaaagagcaatgagctcaaaacagatcccc 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 379 ccatcgagagcattctggcttgtgatgaaagaaagagcaatgagctcaaaacagatcccc 320
Query: 125 agggccatgcctccctgagccttgccgcctagggccatctttccaccagatttggaaaac 184
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 319 agggccatgcctccctgagcctcgccgcctagggccatctttccaccagatttggaaaac 260
Query: 185 ccaaaaaccccatgtgaaacagcctcttcactgggaagattattctgtgcacccag 240
|||||| ||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 259 ccaaaa-ccccatgtgaaacagcctcttcactgggaagatcgttctgtgcacccag 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 10
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 240
Length of database: 639
Length adjustment: 9
Effective length of query: 231
Effective length of database: 630
Effective search space: 145530
Effective search space used: 145530
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no464_e07.g1 MSMg01no464_e07.g1 CHROMAT_FILE:
MSMg01no464_e07.g1 PHD_FILE: MSMg01no464_e07.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:38:58 2005
(494 letters)
>mm_chr6_91795172_91796065
Length = 894
Score = 870 bits (450), Expect = 0.0
Identities = 483/494 (97%)
Strand = Plus / Plus
Query: 1 attccggaactaggcctaataatagctgtgtgtcccatgggagagtgggtatccacaggg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 attccggaactaggcctaataatagctgtgtgtcccatgggagagtgggtatccacaggg 260
Query: 61 agctgtgcacccaacaaaggagtgagtctccatgcagggggactgcacgtttctcccacc 120
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 261 agctgtgcacccaacaaaggagtgagtctccatgcagggggactgcacgtttctcccatc 320
Query: 121 tgtgcccagaatgatggtcgctatggctagaatgccagcgttccaaggaggatggggtat 180
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tgtgcccagaatgatggtcgctatggctagaatgccagcgttccaaggaggatggggtag 380
Query: 181 atttactgatggaagaggagaagatccctatgctcagacagggcccccagaagaggccaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 atttactgatggaagaggagaagatccctatgctcagacagggcccccagaagaggccaa 440
Query: 241 tgaggttttttgtatacagtggcagggggtagggacagcctgtgtggggagggtcttcag 300
||||| || | | |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 tgaggcattcaggagacagtggcagggggtagggacagcctgtgtggggagggtcttcag 500
Query: 301 tgacctgttgctgacaaacaggccacttgctgtcatgtagtacagccacttcaccatgac 360
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 tgacctgttgctgaaaaacaggccacttgctgtcatgtagtacagccacttcaccatgac 560
Query: 361 tgtggattctgtacataggaatttgggcaaaaagaatacgtaacaatcctacaaagatat 420
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 tatggattctgtacataggaatttgggcaaaaagaatacgtaacaatcctacaaagatat 620
Query: 421 agagaatggggcaggatgcagggcagctgacaactggggctgggatcctctgggatattc 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 agagaatggggcaggatgcagggcagctgacaactggggctgggatcctctgggatattc 680
Query: 481 ccttgctggttggt 494
|||||||||||||
Sbjct: 681 tcttgctggttggt 694
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 494
Length of database: 894
Length adjustment: 10
Effective length of query: 484
Effective length of database: 884
Effective search space: 427856
Effective search space used: 427856
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
