Query= MSMg01no464_n15.b1 MSMg01no464_n15.b1 CHROMAT_FILE:
MSMg01no464_n15.b1 PHD_FILE: MSMg01no464_n15.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:39:45 2005
(204 letters)
>mm_chr6_98231027_98231630
Length = 604
Score = 385 bits (199), Expect = e-111
Identities = 202/203 (99%)
Strand = Plus / Plus
Query: 2 tatcttgtccccatccttgtcccaatctggagagcagacaaatgagtttgatagtctctt 61
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 202 tatcttgtccccatccttgtcccaatctggagagcagacaaatgagtttgatagtctctt 261
Query: 62 attgcccaggctccttcagatattagtatagtgagagaattataaggaccccaaaatgac 121
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 262 attgcccaggctccttcagatattagtatagtgagagaattataaggaccccaaaatgac 321
Query: 122 ctctcattgcttcttctcccccatacaggatgctgtgtgtatagtttggatgtcaacttg 181
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 322 ctctcattgcttcttctcccccatacaggatgctgtgtgtatagtttggatgtcaacttg 381
Query: 182 agtctcttctcataagggcatgc 204
|||||||||||| ||||||||||
Sbjct: 382 agtctcttctcaaaagggcatgc 404
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 10
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 204
Length of database: 604
Length adjustment: 8
Effective length of query: 196
Effective length of database: 596
Effective search space: 116816
Effective search space used: 116816
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no464_n15.g1 MSMg01no464_n15.g1 CHROMAT_FILE:
MSMg01no464_n15.g1 PHD_FILE: MSMg01no464_n15.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:39:45 2005
(549 letters)
>mm_chr6_98360746_98361694
Length = 949
Score = 975 bits (504), Expect = 0.0
Identities = 535/550 (97%), Gaps = 10/550 (1%)
Strand = Plus / Minus
Query: 1 acttacacttggggatgtgcgcaaggcatctgttcatgaatagcggaatgatgaccaagt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 693 acttacacttggggatgtgcgcaaggcatctgttcatgaatagcggaatgatgaccaagt 634
Query: 61 cctgatggggaaggcacactgccatctttccctgaaatacatcccaactgagaaatcaat 120
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 633 cctgatggggaaggcacgctgccatctttccctgaaatacatcccaactgagaaatcaat 574
Query: 121 tgcttcatgcctgggttttcttgtatgtcgctttttccccattaaatataaaagtcctgt 180
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 573 tgcttcatgcctgggttttcttgtatgtcgcttttttcccattaaatataaaagtcctgt 514
Query: 181 cgatgatttttttctaagccacctacttttatgctggatatttgttacacgacaaaggaa 240
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 513 cgatga-ttttttctaagccacctacttttatgctggatatttgttacacgacaaaggaa 455
Query: 241 atgatctatcaggcgaaactcatctgtgtgttcctttatgtgtctacacttgaactttct 300
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 454 atgacctatcaggcgaaactcatctgtgtgttcctttatgtgtctacacttgaactttct 395
Query: 301 atgagaaattagtatttgattcactagctaggcatcatggctctgaatttcagaaatcat 360
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 394 atgagaaattagtatttgattcactagctaggcatcatggctctgaatttcaaaaatcat 335
Query: 361 ttttaattacatggtgcacaaaaaatacctcctaatctttcatctgccacaaaaaag-aa 419
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 334 ttttaattacatggtgcacaaaaaatacctcctaatctttcatctgccacaaaaaagaaa 275
Query: 420 aaaaaaaacaacaatatgaatcatgttctaacccctacagtacctctagttagaagagct 479
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 274 aaaaaaaacaacaatatgaatcatgttctaacccttacagtacctctagttagaagagct 215
Query: 480 aacagagtcatatacattcattcattcattcattcattgattcatgaaatagtttatatt 539
||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 214 aacagagtcatatacattcattcattcattc--------attcatgaaatagtttatatt 163
Query: 540 ttgaacttta 549
||||||||||
Sbjct: 162 ttgaacttta 153
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 4
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 549
Length of database: 949
Length adjustment: 10
Effective length of query: 539
Effective length of database: 939
Effective search space: 506121
Effective search space used: 506121
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
