Query= MSMg01no464_p06.b1 MSMg01no464_p06.b1 CHROMAT_FILE:
MSMg01no464_p06.b1 PHD_FILE: MSMg01no464_p06.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:39:52 2005
(426 letters)
>mm_chr6_75637456_75638280
Length = 825
Score = 708 bits (366), Expect = 0.0
Identities = 411/432 (95%), Gaps = 13/432 (3%)
Strand = Plus / Minus
Query: 1 acatattatgtatcataaactaagtgtaaacttctcattcttcttcctctacttcccaga 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 625 acatattatgtatcataaactaagtgtaaacttctcattcttcttcctctacttcccaga 566
Query: 61 gcat-tactgcaggtctatgacactgcacacatatagagtgtttggaaattaaacccatg 119
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 gcatgtactgcaggtctatgacactgcacacatatagagtgtttggaaattaaacccatg 506
Query: 120 gctttgtgcattctatgtgtgcacactccaattgagctcactctttaacctgtcaaattt 179
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 gctttgtgcattctatgcgtgcacactccaattgagctcactctttaacctgtcaaattt 446
Query: 180 tgtttcttaatacgtattttaaaataaagatatatttcattgcaattcagtgctagcttc 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 tgtttcttaatacgtattttaaaataaagatatatttcattgcaattcagtgctagcttc 386
Query: 240 tcttttttt-----tatcttcaaaatcctttctttcttatctagccacattcctgtaaaa 294
|| | |||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 385 tc-----ctaagcatatcttcaaaatcctttctttcttatttagccacattcctgtaaaa 331
Query: 295 agtgctttagacaaggggtcataattgccttgccttaagatctagaattttcctgtcata 354
||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 330 agtgctttagacacggggccataattgccttgccttaagatctagaattttcctgtcata 271
Query: 355 ctttgctgtaaacagggttgattttattaaccactcaatgagagtttaccttatcaacaa 414
||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||
Sbjct: 270 ctttgctgtaaacagggttgattttattaaccactcaat--gagtttaccttagcaacaa 213
Query: 415 tgctagtttgga 426
||||||||||
Sbjct: 212 acctagtttgga 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 426
Length of database: 825
Length adjustment: 9
Effective length of query: 417
Effective length of database: 816
Effective search space: 340272
Effective search space used: 340272
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no464_p06.g1 MSMg01no464_p06.g1 CHROMAT_FILE:
MSMg01no464_p06.g1 PHD_FILE: MSMg01no464_p06.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:39:52 2005
(381 letters)
>mm_chr6_75485583_75486364
Length = 782
Score = 677 bits (350), Expect = 0.0
Identities = 374/384 (97%), Gaps = 5/384 (1%)
Strand = Plus / Plus
Query: 1 aactgaataattattaaaaatataggagatataaataaaatatctagatatgacaaaatt 60
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 201 aactgaataattattaaaaatataggagatgtaaataaaatatctagatatgacaaaatt 260
Query: 61 ttgcagacaataattaatgtaaatagataatgtgatagaagcagattccttctgcacctt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ttgcagacaataattaatgtaaatagataatgtgatagaagcagattccttctgcacctt 320
Query: 121 gacctggtcagtccatgggaagctgtacgctcactattaggaataaacattcttttctca 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gacctggtcagtccatgggaagctgtacgctcactattaggaataaacattcttttctca 380
Query: 181 tgaacactcaacaggagactcatctaaatgacaaaacatttaactgaggaaaattaaaat 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tgaacactcaacaggagactcatctaaatgacaaaacatttaactgaggaaaattaaaat 440
Query: 241 ttct---attaatttttcatccatcaatcaattagctaattcaatatcccctctctcatc 297
| | ||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 441 --cacagaagaatttttcatccatcaatcaattagctaattcaatgtcccctctctcatc 498
Query: 298 tactgaaagactaatacagtgttattgcatctgacttgggcacccaaaatatacaccttt 357
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 499 tactgaaagactaatacagtgttattgcatctgacttgggcacccaaaatatacaccttt 558
Query: 358 gtatatattttgtttatccatgtg 381
||||||||||||||||||||||||
Sbjct: 559 gtatatattttgtttatccatgtg 582
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 381
Length of database: 782
Length adjustment: 9
Effective length of query: 372
Effective length of database: 773
Effective search space: 287556
Effective search space used: 287556
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
