Query= MSMg01no465_g21.b1 MSMg01no465_g21.b1 CHROMAT_FILE:
MSMg01no465_g21.b1 PHD_FILE: MSMg01no465_g21.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:40:31 2005
(371 letters)
>mm_chr6_114215205_114215979
Length = 775
Score = 661 bits (342), Expect = 0.0
Identities = 363/372 (97%), Gaps = 4/372 (1%)
Strand = Plus / Plus
Query: 4 ggaattctcagattacgcgcacgccccacggccg----tgcagatcaatggactgagaag 59
|||||||||||| | |||||||||||||||||| ||||||||||||||||||||||
Sbjct: 204 ggaattctcagagcaggcgcacgccccacggccggccgtgcagatcaatggactgagaag 263
Query: 60 cctgggagactgcccatccgatctgggcttctcagcggccgttttccacttagcctgttt 119
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 cctgggagactgcccatccgatctgggcttctcagcggccgttttccacttagcctgttt 323
Query: 120 gctggtctgtatgctagatggctagactgacttaatgatggagtaattgtaacatgcctc 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 gctggtctgtatgctagatggctagactgacttaatgatggagtaattgtaacatgcctc 383
Query: 180 ttccaacacatggcaagcgctcaatgtagcatgtgagagtgtggcttaggggtcactatg 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 ttccaacacatggcaagcgctcaatgtagcatgtgagagtgtggcttaggggtcactatg 443
Query: 240 atggatggtcttgggagaagccgacaagagacaccattcttggcaggtctccatggccga 299
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 444 atggatggtcttgggagaagccgacaagagacaccattcttagcaggtctccatggccga 503
Query: 300 gctctccttggtgcatttcaatccagagctcttgctgtcacgctcagatcaacccaggaa 359
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 504 gctctccttggtgcatttcaatccagagctcttgctgtcatgctcagatcaacccaggaa 563
Query: 360 ggggacagattg 371
||||||||||||
Sbjct: 564 ggggacagattg 575
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 371
Length of database: 775
Length adjustment: 9
Effective length of query: 362
Effective length of database: 766
Effective search space: 277292
Effective search space used: 277292
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no465_g21.g1 MSMg01no465_g21.g1 CHROMAT_FILE:
MSMg01no465_g21.g1 PHD_FILE: MSMg01no465_g21.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:40:31 2005
(321 letters)
>mm_chr6_114407493_114408213
Length = 721
Score = 598 bits (309), Expect = e-175
Identities = 318/321 (99%)
Strand = Plus / Minus
Query: 1 tgctgaccctaaccaagtgaactccagggtcccggacttgggacagccctcaaaggcctt 60
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 521 tgctgaccctaaccaagtgaactccagggtcccggacttgggacagcccccaaaggcctt 462
Query: 61 ggaggcacagatctgattctggcagtttgatgacatttttaagtgctgcatctcttatgt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 461 ggaggcacagatctgattctggcagtttgatgacatttttaagtgctgcatctcttatgt 402
Query: 121 agctctgaacaccagcagccactgggcccttccacgccatccccaccttatcccagtgtc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 401 agctctgaacaccagcagccactgggcccttccacgccatccccaccttatcccagtgtc 342
Query: 181 tagagtgaacagtcaccctaggaaggcagattctgccccgagcctcactcccagctcagc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 341 tagagtgaacagtcaccctaggaaggcagattctgccccgagcctcactcccagctcagc 282
Query: 241 cttattcttgtccctgtaccatctctgacttagctaaccctcagccacattttcagagga 300
||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 281 cttatccttggccctgtaccatctctgacttagctaaccctcagccacattttcagagga 222
Query: 301 ggtgccaccccttgtctcagc 321
|||||||||||||||||||||
Sbjct: 221 ggtgccaccccttgtctcagc 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 321
Length of database: 721
Length adjustment: 9
Effective length of query: 312
Effective length of database: 712
Effective search space: 222144
Effective search space used: 222144
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
