Query= MSMg01no465_p04.b1 MSMg01no465_p04.b1 CHROMAT_FILE:
MSMg01no465_p04.b1 PHD_FILE: MSMg01no465_p04.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:41:14 2005
(257 letters)
>mm_chr6_127217479_127218135
Length = 657
Score = 458 bits (237), Expect = e-133
Identities = 246/249 (98%)
Strand = Plus / Plus
Query: 5 gaattcttctctactttcagaccaggagtcttcccaaaggctggggcagagaactggggc 64
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattcttccctactttcagaccaggagtcttcccaaaggctggggcagagaactggggc 264
Query: 65 agagagctggggcactgccttcctgtgaatggacttggaagtatcagggtctttgcttgg 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 agagagctggggcactgccttcctgtgaatggacttggaagtatcagggtctttgcttgg 324
Query: 125 ccatgtgattcatagcaaaggaacagtgatcacgacactgtccttctaggaatgtattga 184
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 325 ccatgtgattcatagcaaaggaacggtgatcacgacactgtccttctaggaatgtattga 384
Query: 185 tgctggagccatccttgtccatgggcccatcttcagtacaaagatgctaggaacagaaac 244
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 385 tgctggagccatccttgtccacgggcccatcttcagtacaaagatgctaggaacagaaac 444
Query: 245 cactgctgg 253
|||||||||
Sbjct: 445 cactgctgg 453
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 257
Length of database: 657
Length adjustment: 9
Effective length of query: 248
Effective length of database: 648
Effective search space: 160704
Effective search space used: 160704
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no465_p04.g1 MSMg01no465_p04.g1 CHROMAT_FILE:
MSMg01no465_p04.g1 PHD_FILE: MSMg01no465_p04.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:41:14 2005
(344 letters)
>mm_chr6_127380866_127381609
Length = 744
Score = 629 bits (325), Expect = 0.0
Identities = 342/353 (96%), Gaps = 9/353 (2%)
Strand = Plus / Minus
Query: 1 tttgtaacttctccatccttcccacagtgactcttaacccagttgaatgggaactgggaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 446 tttgtaacttctccatccttcccacagtgactcttaacccagttgaatgggaactgggaa 387
Query: 61 caagagattggtgtccatttccaagtcctgggaagaaatgaaatatgggttgaagcagca 120
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 386 caagagattggtgtccatttccaaatcctgggaagaaatgaaatatgggttgaagcagca 327
Query: 121 gaagcaatgtattattcatcgaaaggaaagcttgaagtagctgcttccaaaatgcatttc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 326 gaagcaatgtattattcatcgaaaggaaagcttgaagtagctgcttccaaaatgcatttc 267
Query: 181 ctttctggcaggggcctgaggcagtcctagaactcacggcccgtgggagaagacaggatt 240
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 266 ctttctggcaggggcctgaggcaatcctagaactcacggcccgtgggagaagacaggatt 207
Query: 241 tt---------gaagagtgcacgagattttcattctgatcagtggagtcaaaggtttggc 291
|| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 206 ttgaagtttgggaagagtgcacgagattttcattctgatcagtggagtcaaaggtttggc 147
Query: 292 tattgtgtttctttgcgaaaccctcccagttagctttctgttgcaatgataaa 344
|||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 146 tattgtgtttctttgcgaaaccctcccagttagctttctgttgcaatgataaa 94
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 3
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 344
Length of database: 744
Length adjustment: 9
Effective length of query: 335
Effective length of database: 735
Effective search space: 246225
Effective search space used: 246225
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
