Query= MSMg01no468_e15.b1 MSMg01no468_e15.b1 CHROMAT_FILE:
MSMg01no468_e15.b1 PHD_FILE: MSMg01no468_e15.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:44:27 2005
(438 letters)
>mm_chr6_18176788_18177627
Length = 840
Score = 770 bits (398), Expect = 0.0
Identities = 429/444 (96%), Gaps = 10/444 (2%)
Strand = Plus / Minus
Query: 1 aaggtggagagcataagacttaaatctgtgcacctggaatctttgctctgatctttcttc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 640 aaggtggagagcataagacttaaatctgtgcacctggaatctttgctctgatctttcttc 581
Query: 61 cttgtacccccctctcttcttctattggtttgtctcatttccttctc--tttttttttta 118
||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||
Sbjct: 580 cttgtacccccctctcttcctctattggtttgtctcatttccttctctttttttttttta 521
Query: 119 gatgtttctgtgttactgctcatagatactcccatttctcctcttacatctctcctcttc 178
|||||||||||||||||| |||||||||||||||||||||||||||||||||||| ||||
Sbjct: 520 gatgtttctgtgttactgttcatagatactcccatttctcctcttacatctctccccttc 461
Query: 179 tctctgtctttcttctctcatccctccacccaactagggtgatgtcagcagggaaataag 238
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 460 tctctgtctttcttctctcatccctccacccaactagggtgatgtcagcagggaaataag 401
Query: 239 atttgtcatag----attttctatgattctaagtttgagtgactgctctagtcacacaac 294
||||||||||| | ||||||||||||||||||||||||||||||||||||||||
Sbjct: 400 atttgtcatagagcca----ctatgattctaagtttgagtgactgctctagtcacacaac 345
Query: 295 tcaagttgatttaaccttgggtgtgaaacgctgaatagaaaaggctgtaaaagatttgat 354
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 344 tcaagttgatttaaccttgggggtgaaacgctgaatagaaaaggctgtaaaagatttgat 285
Query: 355 gagctgggcaggctatacacatttgagggcagttgctgtaactgtgggagcccaaattac 414
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 284 gagctgggcaggctatacacatttgagggcagttgctgtaactgtgggaacccaaattac 225
Query: 415 tacataatcgcaaatctccagaag 438
||||||||||||||||||||||||
Sbjct: 224 tacataatcgcaaatctccagaag 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 4
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 438
Length of database: 840
Length adjustment: 9
Effective length of query: 429
Effective length of database: 831
Effective search space: 356499
Effective search space used: 356499
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no468_e15.g1 MSMg01no468_e15.g1 CHROMAT_FILE:
MSMg01no468_e15.g1 PHD_FILE: MSMg01no468_e15.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:44:27 2005
(392 letters)
>mm_chr6_17952870_17953661
Length = 792
Score = 704 bits (364), Expect = 0.0
Identities = 385/392 (98%)
Strand = Plus / Plus
Query: 1 tttgccaactatagttcataaaagaaggcacaaatactgccaccaagaacagctgcctac 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tttgccaactatagttcataaaagaaggcacaaatactgccaccaagaacagctgcctac 260
Query: 61 cgagctttgggtttctagtagacaacatgttacctaagagttccatttgttttgaacttg 120
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 cgagctttgggtttctagtggacaacatgttacctaagagttccatttgttttgaacttg 320
Query: 121 actggggaagaggtggaggcttacttgtttcctctgttggagaagagacctcgggatgac 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 actggggaagaggtggaggcttacttgtttcctctgttggagaagagacctcgggatgac 380
Query: 181 ctctagcccaggtcagggttttacatcattcccattgaaagtggtctgtgattaggcgca 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 381 ctctagcccaggtcagggttttacatcattcccattgaaagtggtctgtgattagacgca 440
Query: 241 gacacgttctctgttgaggaaggcctcattccttcattacacatggacctatctttaact 300
||||| | ||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 gacacctcctctgcagaggaaggcctcattccttcattacacatggacctatctttaact 500
Query: 301 gaagggttgctttgatttacagatgcctgggggtaatcaccagactagatagctccgaag 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 gaagggttgctttgatttacagatgcctgggggtaatcaccagactagatagctccgaag 560
Query: 361 tcaccagggctcatctcggaaagtccctctct 392
|||||||||||| |||||||||||||||||||
Sbjct: 561 tcaccagggctcttctcggaaagtccctctct 592
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 392
Length of database: 792
Length adjustment: 9
Effective length of query: 383
Effective length of database: 783
Effective search space: 299889
Effective search space used: 299889
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
