Query= MSMg01no470_h16.b1 MSMg01no470_h16.b1 CHROMAT_FILE:
MSMg01no470_h16.b1 PHD_FILE: MSMg01no470_h16.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:47:24 2005
(520 letters)
>mm_chr6_49512253_49513171
Length = 919
Score = 793 bits (410), Expect = 0.0
Identities = 449/466 (96%), Gaps = 9/466 (1%)
Strand = Plus / Minus
Query: 59 gcatggagctcctgagagaaccatgcatgaggctgtgaaggtggatcctaagtttctgtg 118
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 919 gcatggagctcctgagagaaccatgcatgaggctgtgaaggtggatcctaagtttctgtg 860
Query: 119 gagactcagaatttgggagatgccaggaagatgagatgtattctgaggaaaaggcagata 178
||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||
Sbjct: 859 gagactcagaatttgggagatgccaggaagatgagatgtatcctgaggaaagggcagata 800
Query: 179 tcaagtggagctatcccaaaaaggaaagaacatgctacaggtaactagcaaagcccattg 238
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 799 tcaagtggagctatcccaaaaaggaaagaacatgctacaggtaactagcaaagcccattg 740
Query: 239 gagcccagatgatgtttttt----cagttcccaagtgaacacaatcaaaccaatatattt 294
|||||||||||||| | |||| |||||||||||||||||||||||||||||||
Sbjct: 739 gagcccagatgatg----ctaccccagtccccaagtgaacacaatcaaaccaatatattt 684
Query: 295 cctactgtccaaaaaaatatatattctatttcacccaaccaaagacagctttctaatgac 354
|||||||||||||| |||| ||| |||||||||||||||||||||||||||||||||||
Sbjct: 683 cctactgtccaaaataatacata-tctatttcacccaaccaaagacagctttctaatgat 625
Query: 355 gcactgcaagcagaagagtttggcttttgactacatcaaacctccttgcttgctttagaa 414
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 624 gcactacaagcagaagagtttggcttttgactacatcaaacctccttgcttgctttagaa 565
Query: 415 tagtgtcctgccttcatccttgcacaggcataaggccttctgaagacctgtgcttgttgt 474
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 564 tagtgtcctgccttcatccttgcacaggcataaggccttctgaagacctgtgcttgttgt 505
Query: 475 taaaggagcaatctgccctaaaatgtcaagcctgacttctgtctct 520
||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 504 taaaggagcaatctgccctaaaatgtcaagcctgacttctgtctct 459
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 520
Length of database: 919
Length adjustment: 10
Effective length of query: 510
Effective length of database: 909
Effective search space: 463590
Effective search space used: 463590
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no470_h16.g1 MSMg01no470_h16.g1 CHROMAT_FILE:
MSMg01no470_h16.g1 PHD_FILE: MSMg01no470_h16.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:47:24 2005
(489 letters)
>mm_chr6_49316178_49317066
Length = 889
Score = 938 bits (485), Expect = 0.0
Identities = 488/489 (99%)
Strand = Plus / Plus
Query: 1 ttttctcctgagtaacggttaatttcttactccttttcagcttgccagaacaacttatag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ttttctcctgagtaacggttaatttcttactccttttcagcttgccagaacaacttatag 260
Query: 61 ctaaattactaacggatgataattccatttttatataaaatgcgtggagattctttttaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ctaaattactaacggatgataattccatttttatataaaatgcgtggagattctttttaa 320
Query: 121 atgttgaaacagacttatcttggagtcaggtgtatagtttggcagtacagagcttaccta 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 atgttgaaacagacttatcttggagtcaggtgtatagtttggcagtacagagcttaccta 380
Query: 181 gcagctcaaaggctttgtgctcctacccggaaggcaagaacttggctgaattgtttctgc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 gcagctcaaaggctttgtgctcctacccggaaggcaagaacttggctgaattgtttctgc 440
Query: 241 ttgttcttccttaacctgttattttctttggagaacatttttttttccttgtcacctgca 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 441 ttgttcttccttaacctgttattttctttggagaacatttttttttccttgtcacttgca 500
Query: 301 ctggtactcaggattgctggttttatattttattattttccagtggcatcgagacttgaa 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 ctggtactcaggattgctggttttatattttattattttccagtggcatcgagacttgaa 560
Query: 361 cccagggtctcagtatgctaaactcatgctgtccaactaagcttctatgctcagttctca 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 cccagggtctcagtatgctaaactcatgctgtccaactaagcttctatgctcagttctca 620
Query: 421 gcctcaaccgtaatactgaaaacatggacgttgacacccctcccccacacttcagagatg 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 gcctcaaccgtaatactgaaaacatggacgttgacacccctcccccacacttcagagatg 680
Query: 481 tactgattc 489
|||||||||
Sbjct: 681 tactgattc 689
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 489
Length of database: 889
Length adjustment: 10
Effective length of query: 479
Effective length of database: 879
Effective search space: 421041
Effective search space used: 421041
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
