Query= MSMg01no470_m06.b1 MSMg01no470_m06.b1 CHROMAT_FILE:
MSMg01no470_m06.b1 PHD_FILE: MSMg01no470_m06.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:47:47 2005
(201 letters)
>mm_chr6_118065189_118065789
Length = 601
Score = 358 bits (185), Expect = e-103
Identities = 197/201 (98%)
Strand = Plus / Plus
Query: 1 aaagagagggttgttggacacattagaaacccaaaatcctcttactctcatgagagagtt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 aaagagagggttgttggacacattagaaacccaaaatcctcttactctcatgagagagtt 260
Query: 61 tgtagaaaaagacaacttgttctgtttatgtggtataagcaaggggtcaacaaactacag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tgtagaaaaagacaacttgttctgtttatgtggtataagcaaggggtcaacaaactacag 320
Query: 121 ccctgggctaactctagcttgccacttgcttcgtaaataatttgtcatgacaaagacata 180
|||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||
Sbjct: 321 ccctgggctaactctagcctgccacttgcttcataaataatttgtcatgacaaagacata 380
Query: 181 tgtgttctttcacaatacagg 201
|||| |||||||||||||||
Sbjct: 381 tgtgggctttcacaatacagg 401
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 7
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 201
Length of database: 601
Length adjustment: 8
Effective length of query: 193
Effective length of database: 593
Effective search space: 114449
Effective search space used: 114449
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no470_m06.g1 MSMg01no470_m06.g1 CHROMAT_FILE:
MSMg01no470_m06.g1 PHD_FILE: MSMg01no470_m06.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:47:47 2005
(123 letters)
>mm_chr6_118222671_118223193
Length = 523
Score = 209 bits (108), Expect = 5e-59
Identities = 120/124 (96%), Gaps = 2/124 (1%)
Strand = Plus / Minus
Query: 1 cttga-ggtagttcaaccctctacctgacaaaaaataaaattactccccttgtcctagtc 59
||||| || ||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 331 cttgacgg-agttcaaccctctacctgacaaaaaataaaattacaccccttgtcctagtc 273
Query: 60 ttctttctgctgctgtgatgcacactatgactgtggtagtttgagcgagaacggtcccca 119
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 272 ttctttctgctgctgtgatgcacactatgactgtggtagtttgagcgagaacggccccca 213
Query: 120 cagg 123
||||
Sbjct: 212 cagg 209
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 5
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 123
Length of database: 523
Length adjustment: 8
Effective length of query: 115
Effective length of database: 515
Effective search space: 59225
Effective search space used: 59225
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
