Query= MSMg01no472_a12.b1 MSMg01no472_a12.b1 CHROMAT_FILE:
MSMg01no472_a12.b1 PHD_FILE: MSMg01no472_a12.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:49:31 2005
(388 letters)
>mm_chr6_112111532_112112316
Length = 785
Score = 669 bits (346), Expect = 0.0
Identities = 373/390 (95%), Gaps = 15/390 (3%)
Strand = Plus / Plus
Query: 5 gaattctttctctcatgagaaagatgcccttctgtagttaaaaaaaaaaaaaaagtaagc 64
||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 205 gaattctttctctcatgagaaagatgcccttctgtagtt----aaaaaaaaaaagtaagc 260
Query: 65 cttccttaatgcaggcctgccatacactgaccttgaaattcaagcctccagaatcggtta 124
||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 cttccttgatgcaagcctgccatacactgaccttgaaattcaagcctccagaatcggtta 320
Query: 125 agtatgttctgtttcagccatcagtctagaagaagagactgagaagagagatgatgctca 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 agtatgttctgtttcagccatcagtctagaagaagagactgagaagagagatgatgctca 380
Query: 185 tacaggcatctttagaaggttttagaacttgctcaaagaggcagatgttccaggagtttt 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tacaggcatctttagaaggttttagaacttgctcaaagaggcagatgttccaggagtttt 440
Query: 245 ctctcacagtggctcataggctct------ttttttctctgatgcaattggttgctagtt 298
|||||||||||||||||||||||| | ||||||||||||||||||||||||
Sbjct: 441 ctctcacagtggctcataggctctcccacat-----ctctgatgcaattggttgctagtt 495
Query: 299 attaatagatgagactttgaacatcagaatttggagttgatgccagagtgagatgtcttt 358
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 496 attaatagatgagactttgaacatcagaatttggagttgatgccagagtgagatgtcttt 555
Query: 359 gtgggatgtggaaatggagtgggtgggttt 388
||||||||||||||||||||||||||||||
Sbjct: 556 gtgggatgtggaaatggagtgggtgggttt 585
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 388
Length of database: 785
Length adjustment: 9
Effective length of query: 379
Effective length of database: 776
Effective search space: 294104
Effective search space used: 294104
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no472_a12.g1 MSMg01no472_a12.g1 CHROMAT_FILE:
MSMg01no472_a12.g1 PHD_FILE: MSMg01no472_a12.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:49:31 2005
(343 letters)
>mm_chr6_112295848_112296590
Length = 743
Score = 619 bits (320), Expect = 0.0
Identities = 337/343 (98%)
Strand = Plus / Minus
Query: 1 taggagttcactacaacacccagtttatgtgatgaatatttcatgcatgctaggcaagct 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 630 taggagttcactacaacacccagtttatgtgatgaatatttcatgcatgctaggcaagct 571
Query: 61 gtctaccaactgaagcttctctagctctccatttttgtatgtttgattttaataattgtt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 570 gtctaccaactgaagcttctctagctctccatttttgtatgtttgattttaataattgtt 511
Query: 121 caatcagagacatgaaagtcaaataaaagaggtccatttttggaatgacaaagtattatc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 510 caatcagagacatgaaagtcaaataaaagaggtccatttttggaatgacaaagtagtatc 451
Query: 181 ctaaaatgtcaatggtttttgagagaacaacaagtaacacactctatctcccatgaatta 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 450 ctaaaatgtcaatggtttttgagagaacaacaagtaacacactctatctcccatgaatta 391
Query: 241 ctttctttaaatacacccaagatttggtgatagtaggacttgaaagaagggcctgtggca 300
||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 390 ctttcaaaaaatacacccaagatttggtgatagtaggacttgaaagaagggactgtggca 331
Query: 301 gccaagagtctctctctgtgtgtgttgntgtttgaaggtaaga 343
||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 330 gccaagagtctctctctgtgtgtgttgttgtttgaaggtaaga 288
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 343
Length of database: 743
Length adjustment: 9
Effective length of query: 334
Effective length of database: 734
Effective search space: 245156
Effective search space used: 245156
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
