Query= MSMg01no472_n08.b1 MSMg01no472_n08.b1 CHROMAT_FILE:
MSMg01no472_n08.b1 PHD_FILE: MSMg01no472_n08.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:50:36 2005
(485 letters)
>mm_chr6_148407515_148408398
Length = 884
Score = 833 bits (431), Expect = 0.0
Identities = 458/467 (98%), Gaps = 3/467 (0%)
Strand = Plus / Minus
Query: 20 aagtctccttttcctttcttgggtgacttacatttacaaaacaggataggagatccaagg 79
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 684 aagtctccttttcctttcttgggtgacttacatttacaaaacaggataggagatccaagg 625
Query: 80 aggaaggtagagggtcttggcaaaaatcataggaggtgaaactggcatctggaaagaaaa 139
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 624 aggaaggtagagggtcttggcaaaaatcataggaggtgaaactggcatctggaaagaaaa 565
Query: 140 acatactcaaagggagagttgggttagcagatagcagatggcatagatttaatgtgaatc 199
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 564 acatactcaaaggcagagttgggttagcagatagcagatggcatagatttaatgtgaatc 505
Query: 200 aaaagatcacgaggttttctacatttcccagtaaataccctccctttaatgaagctattt 259
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 504 aaaagatcacgaggttttctacatttcccagtaaataccctccctttaatgaagctattt 445
Query: 260 ggatgtcagaatttgtgttagaaatgtcttctagaaaagaggacagg-atattcaatggt 318
||||||||||||||| |||||||||||||||||||||||||| | || ||||||||||||
Sbjct: 444 ggatgtcagaatttgggttagaaatgtcttctagaaaagagggc-ggaatattcaatggt 386
Query: 319 agacactatggtgcttctttactccaagttatctctaaaatgaacaatgtcagttacagt 378
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 agacactatggtgcttcttcactccaagttatctctaaaatgaacaatgtcagttacagt 326
Query: 379 gagcgttcagccgagcggccaacttgcattctaagttatcttgggtgaagctgtatgact 438
|||||||||||| ||| |||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 325 gagcgttcagccaagccgcca-cttgcattctaagttatcttgggtgaagctgtatgact 267
Query: 439 ttgtaagatatcataattgtaagaattcagatctttaatgagaatac 485
|||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 266 ttgtaagatatcataattgtaagaattcagatctttaatgagaatac 220
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 3
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 485
Length of database: 884
Length adjustment: 10
Effective length of query: 475
Effective length of database: 874
Effective search space: 415150
Effective search space used: 415150
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no472_n08.g1 MSMg01no472_n08.g1 CHROMAT_FILE:
MSMg01no472_n08.g1 PHD_FILE: MSMg01no472_n08.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:50:36 2005
(451 letters)
>mm_chr6_148272313_148273163
Length = 851
Score = 849 bits (439), Expect = 0.0
Identities = 448/451 (99%)
Strand = Plus / Plus
Query: 1 attcagacttgccccaaacaagtctcagattccaaagagtttcatgtacacatataatgg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 attcagacttgccccaaacaagtctcagattccaaagagtttcatgtacacatataatgg 260
Query: 61 cttagcagtcaccatgaattcacagagaggcttttgggaagctgtgtccagctttctcac 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 cttagcagtcaccatgaattcacagagaggcttttgggaagctgtgtccagctttctcac 320
Query: 121 ttacaaaatctcccctgtaagttctggctgctaggcaggcataaccacatttgcctgtaa 180
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ttacaaaatctcccccgtaagttctggctgctaggcaggcataaccacatttgcctgtaa 380
Query: 181 tcccagagtttgggatatggaagcaggaggatcagaggctcaaggtcatcctagacacaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tcccagagtttgggatatggaagcaggaggatcagaggctcaaggtcatcctagacacaa 440
Query: 241 atgtattccacaggcagcctgagctgcatgagtccatctcaaacactgaacaaacaaaaa 300
||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 atggaatccacaggcagcctgagctgcatgagtccatctcaaacactgaacaaacaaaaa 500
Query: 301 ctgtagctgctttcgctttactccaacatccagtcaactatttccagccaggaaggtgag 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 ctgtagctgctttcgctttactccaacatccagtcaactatttccagccaggaaggtgag 560
Query: 361 gacaccccaggtgagaggtgtttcatcagtgtggtggcaattactcaatcaacattttct 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 gacaccccaggtgagaggtgtttcatcagtgtggtggcaattactcaatcaacattttct 620
Query: 421 agtttcttctacctgtgatcactttttcaaa 451
|||||||||||||||||||||||||||||||
Sbjct: 621 agtttcttctacctgtgatcactttttcaaa 651
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 451
Length of database: 851
Length adjustment: 10
Effective length of query: 441
Effective length of database: 841
Effective search space: 370881
Effective search space used: 370881
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
