Query= MSMg01no472_o20.b1 MSMg01no472_o20.b1 CHROMAT_FILE:
MSMg01no472_o20.b1 PHD_FILE: MSMg01no472_o20.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:50:44 2005
(427 letters)
>mm_chr6_8085795_8086621
Length = 827
Score = 804 bits (416), Expect = 0.0
Identities = 422/424 (99%)
Strand = Plus / Plus
Query: 1 caaggtaaaactgcagacttagtcctctctgtctgttctccctgtcagccatacccagca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 caaggtaaaactgcagacttagtcctctctgtctgttctccctgtcagccatacccagca 260
Query: 61 cacgtatggccacacacatgtgtaaacagtgtacctgaaacactgactgtactacactgt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 cacgtatggccacacacatgtgtaaacagtgtacctgaaacactgactgtactacactgt 320
Query: 121 ctctgctttacttttgttgactgccaggaccactcaccacaagcaagcattaaaagagaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ctctgctttacttttgttgactgccaggaccactcaccacaagcaagcattaaaagagaa 380
Query: 181 ctagtggggagcagccccaagaagtggcagcatagacaatgtcctgtcccagatccctgc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ctagtggggagcagccccaagaagtggcagcatagacaatgtcctgtcccagatccctgc 440
Query: 241 tcagagggaaaaagcagctggcttgtgtgagcagaagccccaccagaagttcagtacctt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 tcagagggaaaaagcagctggcttgtgtgagcagaagccccaccagaagttcagtacctt 500
Query: 301 ggggacaaagactggctccagcctgcctgatctcccagcctccctcttgggcagaggtag 360
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 501 ggggacaaagactggctccagcctgcctgatctcccagcccccctcttgggcagaggtag 560
Query: 361 tggctcttccagtgacactttcagcagcaagatccgtcactttcttccttacttaaagtt 420
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 561 tggctcttccagtgacactttcagcagcaagatctgtcactttcttccttacttaaagtt 620
Query: 421 ccac 424
||||
Sbjct: 621 ccac 624
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 427
Length of database: 827
Length adjustment: 9
Effective length of query: 418
Effective length of database: 818
Effective search space: 341924
Effective search space used: 341924
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no472_o20.g1 MSMg01no472_o20.g1 CHROMAT_FILE:
MSMg01no472_o20.g1 PHD_FILE: MSMg01no472_o20.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:50:44 2005
(244 letters)
>mm_chr6_8297293_8297935
Length = 643
Score = 435 bits (225), Expect = e-126
Identities = 237/241 (98%), Gaps = 1/241 (0%)
Strand = Plus / Minus
Query: 3 gggttttagtcaattaaagtatatttgaaaagagatgtgttgttggaactgggaaaggaa 62
||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||
Sbjct: 442 gggttttagtcaattaaagtatatttgaaaaaagatgtgtttttggaactgggaaaggaa 383
Query: 63 tactgggaatatgacttcatattttacaggcaaaaagctaatacatcagatttattcatt 122
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 382 tactgggaatatgacttcatattttacaggcaaaaagctaatacatcagatttattcatt 323
Query: 123 cttaaaagtgacactgagaactggagcaagtaagtcatcttcagtaggcagtgatggagg 182
||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 322 cttaaaagtgacactgagaactggagcaagtaagt-gtcttcagtaggcagtgatggagg 264
Query: 183 gcaagtgtcagggctgagacagggcagaggggacataacggagaaggatggaagtgattt 242
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 263 gcaagtgtcagggctgagacagggcagaggggacataacggagaaggatggaagtgattt 204
Query: 243 c 243
|
Sbjct: 203 c 203
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 244
Length of database: 643
Length adjustment: 9
Effective length of query: 235
Effective length of database: 634
Effective search space: 148990
Effective search space used: 148990
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
