Query= MSMg01no473_d22.b1 MSMg01no473_d22.b1 CHROMAT_FILE:
MSMg01no473_d22.b1 PHD_FILE: MSMg01no473_d22.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:51:15 2005
(320 letters)
>mm_chr6_117021944_117022666
Length = 723
Score = 569 bits (294), Expect = e-166
Identities = 315/324 (97%), Gaps = 5/324 (1%)
Strand = Plus / Plus
Query: 1 cactgggaaataaatggtcttaa----ccaccttctgagagagtgactcgacggattgtt 56
||||||||||||||||||||||| ||||||||||||||||||||||||||||| | |
Sbjct: 201 cactgggaaataaatggtcttaaccacccaccttctgagagagtgactcgacggatcg-t 259
Query: 57 gctggagaccatgatgagaagtgacatcagtgttcatgaccttccctgaagaaaagtaaa 116
|||||| ||||||||||||||||||||| |||||||||| ||||||||||||||||||||
Sbjct: 260 gctggataccatgatgagaagtgacatcggtgttcatgatcttccctgaagaaaagtaaa 319
Query: 117 atgattgaaatggtgaatatattatttgctagttgtgctttaaaaacgccatcagagctg 176
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 320 atgattgaaatggtgaatatattatttgctagttgtgctttaaaaacgccatcagagctg 379
Query: 177 ttacatcgtttgttctttgaagcatcttgagaagcagacagttttatttccagttcagac 236
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 380 ttacatcgtttgttctttgaagcatcttgagaagcagacagttttatttccagttcagac 439
Query: 237 agaaggagaataataaaaggaaaatgttgagtttctccagcgggcaagtcaaagctcgca 296
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 440 agaaggagaataataaaaggaaaatgttgagtttctccagcgggcaagtcaaagctcgca 499
Query: 297 cacagactgtgtctacatccttct 320
||||||||||||||||||||||||
Sbjct: 500 cacagactgtgtctacatccttct 523
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 320
Length of database: 723
Length adjustment: 9
Effective length of query: 311
Effective length of database: 714
Effective search space: 222054
Effective search space used: 222054
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no473_d22.g1 MSMg01no473_d22.g1 CHROMAT_FILE:
MSMg01no473_d22.g1 PHD_FILE: MSMg01no473_d22.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:51:15 2005
(464 letters)
>mm_chr6_117160322_117161185
Length = 864
Score = 859 bits (444), Expect = 0.0
Identities = 459/464 (98%)
Strand = Plus / Minus
Query: 1 ggattagctttgaactggcctggagtctcttgccatgacaggcactgggaactcacgtga 60
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 628 ggattagctttgaactggcctggagtcacttgccatgacaggcactgggaactcacgtga 569
Query: 61 gtgatgaggttgcaccggacggagatgcatttctggaaggaggaaagagaagcaggctgt 120
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 568 gtgatgaggttgcatcggacggagatgcatttctggaaggaggaaagagaagcaggctgt 509
Query: 121 ttgtcttccagtctgcactactcagcctgacgtgggagccagggccactcttgttgaaag 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 508 ttgtcttccagtctgcactactcagcctgacgtgggagccagggccactcttgttgaaag 449
Query: 181 gaggacaggcttgggaaaactggttctttacatcctgacttcaggggattctaattccac 240
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 448 gaggacaggcttgggaaaactggttctttacatcctgacttcaggggattctaattccat 389
Query: 241 ccatgctgtcttatgcgagctatgtcagaaacagatgggcctgtttgtatttcactacac 300
|||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 388 ccatgctgtcataagcgagctatgtcagaaacagatgggcctgtttgtatttcactacac 329
Query: 301 tgtcagcatttgattaacatttcactactgcatgcgttgtttcactgggtgctcaaggcc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 328 tgtcagcatttgattaacatttcactactgcatgcgttgtttcactgggtgctcaaggcc 269
Query: 361 actcacacacaagtgtccttttattccagccttaattagtattaactctcaggccacact 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 268 actcacacacaagtgtccttttattccagccttaattagtattaactctcaggccacact 209
Query: 421 tttataatacacacacacacacacacacacacacacacacacac 464
||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 208 tttataatacacacacacacacacacacacacacacacacacac 165
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 51
Number of extensions: 15
Number of successful extensions: 9
Number of sequences better than 10.0: 1
Number of HSP's gapped: 7
Number of HSP's successfully gapped: 1
Length of query: 464
Length of database: 864
Length adjustment: 10
Effective length of query: 454
Effective length of database: 854
Effective search space: 387716
Effective search space used: 387716
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
