Query= MSMg01no474_d14.b1 MSMg01no474_d14.b1 CHROMAT_FILE:
MSMg01no474_d14.b1 PHD_FILE: MSMg01no474_d14.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:52:36 2005
(317 letters)
>mm_chr6_90816840_90817556
Length = 717
Score = 545 bits (282), Expect = e-159
Identities = 308/322 (95%), Gaps = 10/322 (3%)
Strand = Plus / Plus
Query: 1 gaaagttctctttctctctctgatggggcattgtttcctcatgtggcagaaggactgatc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 gaaagttctctttctctctctgatggggcattgtttcctcatgtggcagaaggactgatc 260
Query: 61 tgaagtccttttcccaaaggtacacattccataccagagggcaaaatgtcattgtgtcat 120
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 261 tgaagtccttttcccaaaggtacacattccataccagagggcaaaatgtcatcgtgtcat 320
Query: 121 catctcctaaggccctttaggactcttccccta-----gaggtgaggtctcagtggagag 175
||||||||||||||||||||||||||| | ||||||||||||||||||||||
Sbjct: 321 catctcctaaggccctttaggactctt-----aaaggtgaggtgaggtctcagtggagag 375
Query: 176 tttgaggaacacaaccatcctaacaaccgcaccagacaagtaagagttggcattatttgt 235
|||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 376 tttgaggaacgcaaccatcctaacaacctcaccagacaagtaagagttggcattatttgt 435
Query: 236 ctcctccagttgccccttgcatgaaaggagtctttaagttgaagtgaaggacatttgaca 295
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 436 ctcctccagttgccccttgcatgaaaggagtctttaggttgaagtgaaggacatttgaca 495
Query: 296 gtaattaagagcataaagactt 317
||||||||||||||||||||||
Sbjct: 496 gtaattaagagcataaagactt 517
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 317
Length of database: 717
Length adjustment: 9
Effective length of query: 308
Effective length of database: 708
Effective search space: 218064
Effective search space used: 218064
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no474_d14.g1 MSMg01no474_d14.g1 CHROMAT_FILE:
MSMg01no474_d14.g1 PHD_FILE: MSMg01no474_d14.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:52:36 2005
(220 letters)
>mm_chr6_90967074_90967693
Length = 620
Score = 426 bits (220), Expect = e-124
Identities = 220/220 (100%)
Strand = Plus / Minus
Query: 1 ttgggctacccagcttcatcacgtacacagtgggtgtcttggatcccacagctggcagcc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 420 ttgggctacccagcttcatcacgtacacagtgggtgtcttggatcccacagctggcagcc 361
Query: 61 agggccctctgtccactgccctgaccttctccagccctgccactaaccaggccatcacca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 360 agggccctctgtccactgccctgaccttctccagccctgccactaaccaggccatcacca 301
Query: 121 ttccagtcaccgtggcctttgtgttggatcgtcgtgggcctggtccctgtgagtcataga 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 300 ttccagtcaccgtggcctttgtgttggatcgtcgtgggcctggtccctgtgagtcataga 241
Query: 181 tgagatatcaactgacccagatctgggcagggaaagctgg 220
||||||||||||||||||||||||||||||||||||||||
Sbjct: 240 tgagatatcaactgacccagatctgggcagggaaagctgg 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 220
Length of database: 620
Length adjustment: 9
Effective length of query: 211
Effective length of database: 611
Effective search space: 128921
Effective search space used: 128921
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
