Query= MSMg01no474_d22.b1 MSMg01no474_d22.b1 CHROMAT_FILE:
MSMg01no474_d22.b1 PHD_FILE: MSMg01no474_d22.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:52:37 2005
(536 letters)
>mm_chr6_6203281_6204216
Length = 936
Score = 799 bits (413), Expect = 0.0
Identities = 454/477 (95%), Gaps = 18/477 (3%)
Strand = Plus / Minus
Query: 61 actgagattgttttaaaagagattgtcttcctcgaaaattcagtgaattatttagtagtc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 936 actgagattgttttaaaagagattgtcttcctcgaaaattcagtgaattatttaggagtc 877
Query: 121 aagtgttatgatttctataagttgccttctatcatatatgcatgcatgtatgtatacata 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 876 aagtgttatgatttctataagttgccttctatcatatatgcatgcatgtatgtatacata 817
Query: 181 tacatatacatgtatatattcacacatatatatacacatatatacatacatacatacata 240
||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||
Sbjct: 816 tacatatacatgtatatattcgcacatatatatacac----atacatacatacatacata 761
Query: 241 catacatgcatacatatatacatacatacatatgtgtatgtatatgtacacagagaaaca 300
||||| ||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 760 catac------------atacatacatacatatgtgtatgtacatgtacacagagaaaca 713
Query: 301 ttaacaaatgttaggaatttgtcaatctcagtaaagttgaattttcacttcattctttga 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 712 ttaacaaatgttaggaatttgtcaatctcagtaaagttgaattttcacttcattctttga 653
Query: 361 acttctcaataactttgaaattgtcagagacattaaattacagaaaaaagatataagaaa 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 652 acttctcaataactttgaaattgtcagagacattaaattacagaaaaaagatataagaaa 593
Query: 421 aatttctccttacagagtattttgtataatgcatgtaaaggaatgatgggattagactat 480
||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 592 aatttctttttacagagtattttgtataatgcatgtaaaggaatgatgggattagactat 533
Query: 481 tttcattttgtaatttaagagttgttcatcaattggncataaagg-aaaagtactgg 536
|||||||||||||||||||||||||||||||||||| |||||||| |||||||||||
Sbjct: 532 tttcattttgtaatttaagagttgttcatcaattgg-cataaaggaaaaagtactgg 477
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 36
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 536
Length of database: 936
Length adjustment: 10
Effective length of query: 526
Effective length of database: 926
Effective search space: 487076
Effective search space used: 487076
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no474_d22.g1 MSMg01no474_d22.g1 CHROMAT_FILE:
MSMg01no474_d22.g1 PHD_FILE: MSMg01no474_d22.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:52:37 2005
(424 letters)
>mm_chr6_6041010_6041833
Length = 824
Score = 785 bits (406), Expect = 0.0
Identities = 418/422 (99%)
Strand = Plus / Plus
Query: 1 tcctggctctgtttccaataagctgagatcacaggaaatccactgctcccagttggcttt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tcctggctctgtttccaataagctgagatcacaggaaatccactgctcccagttggcttt 260
Query: 61 tacatggatgtctcagatgacagctctggtcctcacactggcgtgaccagtattttagcc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tacatggatgtctcagatgacagctctggtcctcacactggcgtgaccagtattttagcc 320
Query: 121 actgagccacctcaatagccctggcagtgctatctttacctgtcattttcagaacaagtg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 actgagccacctcaatagccctggcagtgctatctttacctgtcattttcagaacaagtg 380
Query: 181 ttgtcatcttatcaatgacttttcccatgaatgatgacaaactcaagccatcgcatgcac 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ttgtcatcttatcaatgacttttcccatgaatgatgacaaactcaagccatcgcatgcac 440
Query: 241 tcacgtatgtttgtttgcacgtgagtgcaccacaacagggaaatacccagactataatac 300
||||||| || || |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 tcacgtacgtatgcatgcacgtgagtgcaccacaacagggaaatacccagactataatac 500
Query: 301 cgcaagtgcaaccactgcctttacaaaaactatgacagaatttattttctactgacatag 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 cgcaagtgcaaccactgcctttacaaaaactatgacagaatttattttctactgacatag 560
Query: 361 aaatatatagatagatagatatagatagatagatataggtatagagatagatagatagat 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 aaatatatagatagatagatatagatagatagatataggtatagagatagatagatagat 620
Query: 421 ag 422
||
Sbjct: 621 ag 622
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 32
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 424
Length of database: 824
Length adjustment: 9
Effective length of query: 415
Effective length of database: 815
Effective search space: 338225
Effective search space used: 338225
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
