Query= MSMg01no474_i08.b1 MSMg01no474_i08.b1 CHROMAT_FILE:
MSMg01no474_i08.b1 PHD_FILE: MSMg01no474_i08.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:53:00 2005
(393 letters)
>mm_chr6_35030863_35031655
Length = 793
Score = 704 bits (364), Expect = 0.0
Identities = 385/396 (97%), Gaps = 8/396 (2%)
Strand = Plus / Plus
Query: 1 ccacagttaacaattctatgctaaaagtatgttgaaatcactatttgcaggtcaaactgg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ccacagttaacaattctatgctaaaagtatgttgaaatcactatttgcaggtcaaactgg 260
Query: 61 aaaagctataaactaatctacatgttgatgtaattcctcatcaaaatcacatcataatgg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 aaaagctataaactaatctacatgttgatgtaattcctcatcaaaatcacatcataatgg 320
Query: 121 ttttaacaacacacataatatgacaaagtgcttctaaaggttacactgaagagcacttga 180
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 321 ttttaacaacacacataatatgacaaagtgcttctaaaggttacactgaagagtacttga 380
Query: 181 gaataactgtcatttttgaaggaaaatatgatgattagccttatcagatactcatctgtc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 gaataactgtcatttttgaaggaaaatatgatgattagccttatcagatactcatctgtc 440
Query: 241 tttgtgttttttt---cacctttaatcccaacactcgggaggcagaggcaggcggatttc 297
|||||| | |||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 441 tttgtggt-----gcacacctttaatcccagcactcgggaggcagaggcaggcggatttc 495
Query: 298 tgagttcgaggccaccctggtctacaaagtgagttccaggacagtcagggctatacagag 357
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 496 tgagttcgaggccaccctggtctacaaagtgagttccaggacagtcagggctatacagag 555
Query: 358 aaaccctgtctcggaaaacaaaaacaaaaacaaaaa 393
||||||||||||||||||||||||||||||||||||
Sbjct: 556 aaaccctgtctcggaaaacaaaaacaaaaacaaaaa 591
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 393
Length of database: 793
Length adjustment: 9
Effective length of query: 384
Effective length of database: 784
Effective search space: 301056
Effective search space used: 301056
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no474_i08.g1 MSMg01no474_i08.g1 CHROMAT_FILE:
MSMg01no474_i08.g1 PHD_FILE: MSMg01no474_i08.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:53:00 2005
(243 letters)
>mm_chr6_35220446_35221088
Length = 643
Score = 470 bits (243), Expect = e-137
Identities = 243/243 (100%)
Strand = Plus / Minus
Query: 1 attctctaggcataccagcttgggcttgaactcagagatatacctgcctctgtttcccag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 549 attctctaggcataccagcttgggcttgaactcagagatatacctgcctctgtttcccag 490
Query: 61 tactgggaggagtacaggaatgaaagataactgggccaccacgccctttgagaccttgtc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 489 tactgggaggagtacaggaatgaaagataactgggccaccacgccctttgagaccttgtc 430
Query: 121 ttaaaacactgcaatattgaaagccatgggttcaaatcccaaagagagcaattaagctat 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 429 ttaaaacactgcaatattgaaagccatgggttcaaatcccaaagagagcaattaagctat 370
Query: 181 cttctagggctgggtgggtccctcagatctctaccccaaggatgagggattcttgcttca 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 369 cttctagggctgggtgggtccctcagatctctaccccaaggatgagggattcttgcttca 310
Query: 241 att 243
|||
Sbjct: 309 att 307
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 243
Length of database: 643
Length adjustment: 9
Effective length of query: 234
Effective length of database: 634
Effective search space: 148356
Effective search space used: 148356
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
