Query= MSMg01no475_d11.b1 MSMg01no475_d11.b1 CHROMAT_FILE:
MSMg01no475_d11.b1 PHD_FILE: MSMg01no475_d11.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:53:55 2005
(244 letters)
>mm_chr6_71949410_71950053
Length = 644
Score = 339 bits (175), Expect = 1e-97
Identities = 236/281 (83%), Gaps = 39/281 (13%)
Strand = Plus / Minus
Query: 1 agccaagcaagagtgaggaactgactcaggtaacaaatttacagagagccccgggtttta 60
||||||||||||| ||||||||||||||||| ||||||||||||||||||| ||||||||
Sbjct: 577 agccaagcaagagagaggaactgactcaggttacaaatttacagagagccctgggtttta 518
Query: 61 cagagaatagatctg-----------------------------ataattaaatcagaat 91
|||||| |||||||| ||||||||||||||||
Sbjct: 517 cagagactagatctgatcaggatgtggggacgtgctaggtaccaataattaaatcagaat 458
Query: 92 ttctt----------tctctcacctctctctactgtgactgcaattgctgccaaccatgg 141
||||| ||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 457 ttcttggatgtgtagtctctcacctctctctactgtaactgcaattgctgccaaccatgg 398
Query: 142 tctcttggctatgtaccaatggactgtgttagatagtaactgcttgctgaggctatatag 201
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 397 tctcttggctatgtaccaatggactgtgttagatagtaactgcttgctgaggctatatag 338
Query: 202 actatgggttagcagaaaactgcagggattgaggaaggaga 242
||||||||||||||| |||||||||||||||||||||||||
Sbjct: 337 actatgggttagcaggaaactgcagggattgaggaaggaga 297
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 9
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 244
Length of database: 644
Length adjustment: 9
Effective length of query: 235
Effective length of database: 635
Effective search space: 149225
Effective search space used: 149225
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no475_d11.g1 MSMg01no475_d11.g1 CHROMAT_FILE:
MSMg01no475_d11.g1 PHD_FILE: MSMg01no475_d11.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:53:55 2005
(236 letters)
>mm_chr6_72194794_72195429
Length = 636
Score = 456 bits (236), Expect = e-133
Identities = 236/236 (100%)
Strand = Plus / Minus
Query: 1 tgtccccacacgccctggcccttggctaacaggccttggcgacactcccttgctctgaca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 436 tgtccccacacgccctggcccttggctaacaggccttggcgacactcccttgctctgaca 377
Query: 61 cctggcctttgcctgacctcatgagcaggcctgggcgccaggctcagccctccctggctg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 376 cctggcctttgcctgacctcatgagcaggcctgggcgccaggctcagccctccctggctg 317
Query: 121 gcccatcccctggctgcccaagtctggcttatgacatctttccactgagcagcccttatt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 316 gcccatcccctggctgcccaagtctggcttatgacatctttccactgagcagcccttatt 257
Query: 181 ttgagacagcaaacccaacggcgcccacaggcatgtacacacgctagcacacgcgc 236
||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 256 ttgagacagcaaacccaacggcgcccacaggcatgtacacacgctagcacacgcgc 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 236
Length of database: 636
Length adjustment: 9
Effective length of query: 227
Effective length of database: 627
Effective search space: 142329
Effective search space used: 142329
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
