XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAATTCCATGT
GCTATCCCAATGGTTCTTCGTATTTGTAATTTTGCTACTGCTATAATTAT
GAAGCATCATTGATAATAATTTTATGGTTGTGGGTAACAAAACCATGAGT
AACTGTAAGGGTCACAGCATTAGGAAGGTGGAGAACCACTAAGCTTAAAG
AAGATCTCTGTCATGAGTTTTCCAACATGAAAGCACAGAGTGTTTGGGAA
AATTGTATAATTCAAAGAATAAAACAAACAGGCCTTAACTATAAAGTCTA
AAAGTGTTGTAGATATGACTTAGACTTTGGCTTTGAAATATATGTGTAAT
TAAATTGAGAAGTATTTCACTAATATTTTTTATAAATATCAAAAGTTGAT
TCTTCTCTGATAGAAAACCAGAGTTAGAATGCCAATAGGAGTATTTTGGC
CTTCAGACTCTCTGGCTATGTGGCTTGGTTCTTTACAGCATGGTGCTAAT
GAGGGTAAGTTCAGGNATTGGAGCCCCTGTGTGGCTTAATTAACTTCATA
CTGAGGACAATCTCTGTTCTGGATCCTGAGCTACTGTCTAACTCTTGCCA
GCTGTATTACCAATGCATGTAACCTTATCCAAGCGATATAAACATTCTCT
ATCCGTTAATTATCTGTTAACGCCACGATTAACTACCCACTATTGCTTCC
AAAATATTAATTTAATTTGGAAAAAACTTTTTCTTTCTCGAAACTCACTT
T

TTCCCCGATGATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXACGCAGTTGAATCCTTCTTA
ACAGTCTGCTTTACGGGAACCTTTCCTACCGCGACCCGCAGTTCTGGTTC
TGGAATGAGGGATCTTCCCTGCGCCAGTCCCGAGTTTTTTCTCGTCCCGG
GTTTCGGCACCAATTGTTATTAGACGCGTTCTCACGACCGGCCAGGAAAG
ACGCAACAGACCAGAATCTTTTGCGGCAAAACTTTATTGCTTACATCTTC
AGGAGCCAGAGTGCAAGAAGCAAGAGAGAGAGAAAACGAAACCCTGTCCC
TCTTAAGGAGAATTATCCTTCGCCTCGGACGTGTCACTCCCTGATTGGCT
GCAGCCCATCGGCCGAGTTGACGTCACGGGGAAGGCAGAGTACAAGTAGT
CACAAAATACCCTTGGCACATGCGCACATTATTTGTTTACCACTTAGAAC
ACAGCTGTCACCGCCATCTTGTAACGGCGAATGTGGGCGCGTTTCCTCCC
ACTCCACTTATTGGGTAATGGATTTTTCCTTTTCCTACTCCCATTGCGTC
TTTTCTTTCCCCTCTCCTCCCATATTCTTTTTTACTGTCGTTCCCCTCTC
ATTTCCTTTTCTCTTTCCCCTTTTACGTCTCGTTCTCCCCTCCCCTAATC
TTTTTCCCCCCCTTCCCCCTTTTTTTTTTCTTTCCCCCCCCGTAACCTCC
CTCTTCTCTTT

Query= MSMg01no475_d22.b1 MSMg01no475_d22.b1 CHROMAT_FILE:
MSMg01no475_d22.b1 PHD_FILE: MSMg01no475_d22.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:53:57 2005
         (482 letters)



>mm_chr6_11268176_11269057
          Length = 882

 Score =  926 bits (479), Expect = 0.0
 Identities = 481/482 (99%)
 Strand = Plus / Minus

                                                                       
Query: 1   tggttcttcgtatttgtaattttgctactgctataattatgaagcatcattgataataat 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 812 tggttcttcgtatttgtaattttgctactgctataattatgaagcatcattgataataat 753

                                                                       
Query: 61  tttatggttgtgggtaacaaaaccatgagtaactgtaagggtcacagcattaggaaggtg 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 752 tttatggttgtgggtaacaaaaccatgagtaactgtaagggtcacagcattaggaaggtg 693

                                                                       
Query: 121 gagaaccactaagcttaaagaagatctctgtcatgagttttccaacatgaaagcacagag 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 692 gagaaccactaagcttaaagaagatctctgtcatgagttttccaacatgaaagcacagag 633

                                                                       
Query: 181 tgtttgggaaaattgtataattcaaagaataaaacaaacaggccttaactataaagtcta 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 632 tgtttgggaaaattgtataattcaaagaataaaacaaacaggccttaactataaagtcta 573

                                                                       
Query: 241 aaagtgttgtagatatgacttagactttggctttgaaatatatgtgtaattaaattgaga 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 572 aaagtgttgtagatatgacttagactttggctttgaaatatatgtgtaattaaattgaga 513

                                                                       
Query: 301 agtatttcactaatattttttataaatatcaaaagttgattcttctctgatagaaaacca 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 512 agtatttcactaatattttttataaatatcaaaagttgattcttctctgatagaaaacca 453

                                                                       
Query: 361 gagttagaatgccaataggagtattttggccttcagactctctggctatgtggcttggtt 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 452 gagttagaatgccaataggagtattttggccttcagactctctggctatgtggcttggtt 393

                                                                       
Query: 421 ctttacagcatggtgctaatgagggtaagttcaggnattggagcccctgtgtggcttaat 480
           ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 392 ctttacagcatggtgctaatgagggtaagttcagggattggagcccctgtgtggcttaat 333

             
Query: 481 ta 482
           ||
Sbjct: 332 ta 331


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 482
Length of database: 882
Length adjustment: 10
Effective length of query: 472
Effective length of database: 872
Effective search space:   411584
Effective search space used:   411584
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)