Query= MSMg01no475_k06.b1 MSMg01no475_k06.b1 CHROMAT_FILE:
MSMg01no475_k06.b1 PHD_FILE: MSMg01no475_k06.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:54:29 2005
(351 letters)
>mm_chr6_52155972_52156728
Length = 757
Score = 571 bits (295), Expect = e-167
Identities = 339/357 (94%), Gaps = 6/357 (1%)
Strand = Plus / Minus
Query: 1 ctgactcggcggcgccgcatcgagatcgccaacgcgctttgcctcaccgagcgccagatc 60
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 557 ctgactcggcggcgccgcatcgagatcgctaacgcgctttgcctcaccgagcgccagatc 498
Query: 61 aagatctggttccagaatcggcgcatgaaatggaaaaaggaaaataaactcatcaactcc 120
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 497 aagatctggttccagaatcggcgcatgaagtggaaaaaggaaaataaactcatcaactcc 438
Query: 121 acgcaggccagcggggaagactctgaggccaaagcgggcgagtagactccagtgcaggga 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 437 acgcaggccagcggggaagactctgaggccaaagcgggcgagtagactccagtgcaggga 378
Query: 181 ccaggtcagcgttgtaacctctattggctttgccccctggtgcccttgtctgctccccaa 240
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 377 ccaggccagcgttgtaacctctattggctttgccccctggtgcccttgtctgctccccaa 318
Query: 241 gttttattccattttttttctcccgcagcttagggaaaagcgtccaaagctttgcaag-- 298
||||||||||| | ||||||||||||||||||||||||||||||| |||||||||
Sbjct: 317 gttttattccagcctgcttctcccgcagcttagggaaaagcgtccaaacctttgcaagcg 258
Query: 299 ----cgcatttacttattacagaaaacaaacaaactttaccccacacacccaacgtc 351
||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 257 gctacgcatttacttattacagaaaacaaacaaacaaaaccccacacacccaacgtc 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 351
Length of database: 757
Length adjustment: 9
Effective length of query: 342
Effective length of database: 748
Effective search space: 255816
Effective search space used: 255816
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no475_k06.g1 MSMg01no475_k06.g1 CHROMAT_FILE:
MSMg01no475_k06.g1 PHD_FILE: MSMg01no475_k06.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:54:29 2005
(362 letters)
>mm_chr6_52025729_52026490
Length = 762
Score = 696 bits (360), Expect = 0.0
Identities = 360/360 (100%)
Strand = Plus / Plus
Query: 1 acttacaaaataaatctgaactttcagaaagataaagtctacttacctgcatccctaagc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 acttacaaaataaatctgaactttcagaaagataaagtctacttacctgcatccctaagc 260
Query: 61 agccgattatggcttcctctgagatggctgcaagcactctccctgttcttaatggaatgg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 agccgattatggcttcctctgagatggctgcaagcactctccctgttcttaatggaatgg 320
Query: 121 agcaattgctgctcaaatcaccattgtgaaggcattacacaattttatctgtctgtattc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 agcaattgctgctcaaatcaccattgtgaaggcattacacaattttatctgtctgtattc 380
Query: 181 tatttctgcttcacgttgttgttatatggaagcactatagcaatgtgttttttttatcat 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tatttctgcttcacgttgttgttatatggaagcactatagcaatgtgttttttttatcat 440
Query: 241 tgcaaaggcagataaaatagtttaactagtacagcaaattgcagaattatacatataaat 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 tgcaaaggcagataaaatagtttaactagtacagcaaattgcagaattatacatataaat 500
Query: 301 cgcctgctgctgccttcagattacgcctgtacagataaaaagcatttttcacctttaaaa 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 cgcctgctgctgccttcagattacgcctgtacagataaaaagcatttttcacctttaaaa 560
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 362
Length of database: 762
Length adjustment: 9
Effective length of query: 353
Effective length of database: 753
Effective search space: 265809
Effective search space used: 265809
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
