Query= MSMg01no475_l08.b1 MSMg01no475_l08.b1 CHROMAT_FILE:
MSMg01no475_l08.b1 PHD_FILE: MSMg01no475_l08.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:54:34 2005
(250 letters)
>mm_chr6_87526831_87527480
Length = 650
Score = 470 bits (243), Expect = e-137
Identities = 246/247 (99%)
Strand = Plus / Plus
Query: 1 tatgtactctgcaccaaggaattctgtgatagaagagtgctgggctcagtttcagaagcc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tatgtactctgcaccaaggaattctgtgatagaagagtgctgggctcagtttcagaagcc 260
Query: 61 ctgaggtctaactggctctcacagtgtccaactgtgtaacattaaactccatcatatcca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 261 ctgaggtctaactggctctcacagtgtccaactgtgtaacattaaactccatcatgtcca 320
Query: 121 tcctcctcaccccacactacccccataccacccctactgcactcccaccctcctccacct 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tcctcctcaccccacactacccccataccacccctactgcactcccaccctcctccacct 380
Query: 181 cactcctaccctcctacacccccacctctctcaccctcccccacctcgcccccacttgct 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 cactcctaccctcctacacccccacctctctcaccctcccccacctcgcccccacttgct 440
Query: 241 gttcttg 247
|||||||
Sbjct: 441 gttcttg 447
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 250
Length of database: 650
Length adjustment: 9
Effective length of query: 241
Effective length of database: 641
Effective search space: 154481
Effective search space used: 154481
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no475_l08.g1 MSMg01no475_l08.g1 CHROMAT_FILE:
MSMg01no475_l08.g1 PHD_FILE: MSMg01no475_l08.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:54:35 2005
(118 letters)
>mm_chr6_87693349_87693867
Length = 519
Score = 223 bits (115), Expect = 4e-63
Identities = 118/119 (99%), Gaps = 1/119 (0%)
Strand = Plus / Minus
Query: 1 ttcacagcactgtgctttgag-atttaatccccaaatcaaaatgctgaagggtgtttgga 59
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 319 ttcacagcactgtgctttgagaatttaatccccaaatcaaaatgctgaagggtgtttgga 260
Query: 60 gacagagcgtttgggaggaggttaggattaggtgacaccgtgaggatgtgtccccatgg 118
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 259 gacagagcgtttgggaggaggttaggattaggtgacaccgtgaggatgtgtccccatgg 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 4
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 118
Length of database: 519
Length adjustment: 8
Effective length of query: 110
Effective length of database: 511
Effective search space: 56210
Effective search space used: 56210
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
