Query= MSMg01no477_a20.b1 MSMg01no477_a20.b1 CHROMAT_FILE:
MSMg01no477_a20.b1 PHD_FILE: MSMg01no477_a20.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:56:22 2005
(622 letters)
>mm_chr6_39722378_39723399
Length = 1022
Score = 750 bits (388), Expect = 0.0
Identities = 412/426 (96%), Gaps = 10/426 (2%)
Strand = Plus / Minus
Query: 207 gatttttaagtctttctatctatacttgacttattctccacccattttagtgtccaaatg 266
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1022 gatttttaagtctttctatctatacttgacttattctccacccattttagtgtccaaatg 963
Query: 267 gggtctagccagggatggtggtgtttgtaattccagcacccgggatccgcaggccgaagg 326
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 962 gggtctagccagggatggtggtgtttgtaatcccagcacccgggatccgcaggccgaagg 903
Query: 327 ataagatgtttcaagacagcttgggttatatagtgagactctagcctaaaaaacaaaaaa 386
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 902 ataagatgtttcaagacagcttgggttatatagtgagactctagcctaaaaaacaaaaaa 843
Query: 387 aaaaaaaaa----------aggaagaaaggatctaaaggcagccctggcaagcctgccag 436
||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 842 aaaaaaaaagggggggggggggaagaaaggatctaaaggcagccctggcaagcctgccag 783
Query: 437 cgcctcagggctcatctcctcatggctcatctcctcagggccttttctcagaccattcag 496
| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 782 cacctcagggctcatctcctcatggctcatctcctcagggccttttctcagaccattcgg 723
Query: 497 tgggctccagagttgctctcaaattgaggcacttgttcctgcagttttgcatcccccaac 556
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 722 tgggctccagagttgctctcaaattgaggcacttgttcctgcagttttgcatcccccaac 663
Query: 557 tttattctacttctctgtgttggctcactgaagcttcttggttggtcatactttcctatt 616
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 662 tttattctacttctctgtgttggctcactgaagcttcttggttggtcatactttcctatt 603
Query: 617 caataa 622
||||||
Sbjct: 602 caataa 597
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 622
Length of database: 1022
Length adjustment: 10
Effective length of query: 612
Effective length of database: 1012
Effective search space: 619344
Effective search space used: 619344
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no477_a20.g1 MSMg01no477_a20.g1 CHROMAT_FILE:
MSMg01no477_a20.g1 PHD_FILE: MSMg01no477_a20.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:56:22 2005
(573 letters)
>mm_chr6_39534818_39535790
Length = 973
Score = 1062 bits (549), Expect = 0.0
Identities = 567/573 (98%)
Strand = Plus / Plus
Query: 1 cattgtagatgattgtgtgagttatgatgtggttgttgggatttgatctcaggacctctg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 cattgtagatgattgtgtgagttatgatgtggttgttgggatttgatctcaggacctctg 260
Query: 61 gaagagcagtcagtgctcttaaccactgagccatctctccagcccaggatcttactttta 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gaagagcagtcagtgctcttaaccactgagccatctctccagcccaggatcttactttta 320
Query: 121 actcacagagatccatctgcctctgccttagagcactggaattaaagatgtattctacta 180
||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||
Sbjct: 321 actcacagagatccatctgcctctgccttagagcactggaattaaagatgtgctccacta 380
Query: 181 ctcccgggtagagatctgttttctttgaaaaagaagcagtatttaggggcattcctgatt 240
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 381 ctcccgggtagagatctgttttctttgaaaaagaagccgtatttaggggcattcctgatt 440
Query: 241 ggctttttgaaggaaccaactaaagctgtagcccgagccagtttgaacgtgcctcctgct 300
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 441 ggctttttgaaggaaccaactaaagctgtagcccgagccggtttgaacgtgcctcctgct 500
Query: 301 taaacaatgggatgcagtctgtgtggggctcaccagggaagggctgtggagacggtgtcc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 taaacaatgggatgcagtctgtgtggggctcaccagggaagggctgtggagacggtgtcc 560
Query: 361 ccggagactgtaggtactttggttggaggggatcagggatctggagaaaggtcggcatca 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 ccggagactgtaggtactttggttggaggggatcagggatctggagaaaggtcggcatca 620
Query: 421 cagggaccaggaaagctcagcccctccagcctagcttgtagggcctggtggctccaactg 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 cagggaccaggaaagctcagcccctccagcctagcttgtagggcctggtggctccaactg 680
Query: 481 gaccagtggtcatcatggtcacggaagtgccccatggggcccaagagggagatatctgca 540
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 681 gaccagtggtcatcatggtcacggaagtgccccatgtggcccaagagggagatatctgca 740
Query: 541 tcgctgtcctagcagagtccttgaaatcttaaa 573
|||||||||||||||||||||||||||||||||
Sbjct: 741 tcgctgtcctagcagagtccttgaaatcttaaa 773
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 573
Length of database: 973
Length adjustment: 10
Effective length of query: 563
Effective length of database: 963
Effective search space: 542169
Effective search space used: 542169
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
