Query= MSMg01no478_i23.b1 MSMg01no478_i23.b1 CHROMAT_FILE:
MSMg01no478_i23.b1 PHD_FILE: MSMg01no478_i23.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:58:18 2005
(415 letters)
>mm_chr6_84061126_84061938
Length = 813
Score = 758 bits (392), Expect = 0.0
Identities = 408/414 (98%), Gaps = 2/414 (0%)
Strand = Plus / Plus
Query: 2 cttgaagttgtggggacattggatgcgatgctcacgtctcgccagagcatgaagtactga 61
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 202 cttgaagttgtggggacattggatgcgatgctcgcgtctcgccagagcatgaagtactga 261
Query: 62 aaatgaaacaaagtggctttcattgctcctctggtggagctctgctgtttctaggatggt 121
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 262 aaatgaaacgaagtggctttcattgctcctctggtggagctctgctgtttctaggatggt 321
Query: 122 gctgtccagcgcagcagccacacagagccatttgaattacttaatggccaatcatgaaaa 181
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 322 gctgtccagcgcagcagccacacagagccatttgaattacttaatggccaatcatgaaaa 381
Query: 182 ctccatttccctggttacacgagtcacttttcagatggcttgtgggtaccctactggacc 241
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 382 ctccatttccctggttacacgagtcacttttcagatggcttgtgggtgccctactggacc 441
Query: 242 ttgtagagatgagccttttccactgtaatggaaagttacctcaaatgatagatgtaagaa 301
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 442 ttgtagagatgagccttttccactgtaatggaaagttacctcaaatgatagatgtaagaa 501
Query: 302 ggtggcgggggaggggatattagagaccctattgtagatatgaccccacctgtagggagc 361
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 502 ggtggcgggggaggggatattagagaccctattgtagatatgaccccatctgtagggagc 561
Query: 362 tcctacatggttgctattgtctttttttttgataaataggactcttggggagaa 415
|||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 562 tcctacatggttgctattgtcttttttt--gataaataggactcttggggagaa 613
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 415
Length of database: 813
Length adjustment: 9
Effective length of query: 406
Effective length of database: 804
Effective search space: 326424
Effective search space used: 326424
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no478_i23.g1 MSMg01no478_i23.g1 CHROMAT_FILE:
MSMg01no478_i23.g1 PHD_FILE: MSMg01no478_i23.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:58:18 2005
(459 letters)
>mm_chr6_84240521_84241380
Length = 860
Score = 866 bits (448), Expect = 0.0
Identities = 457/460 (99%), Gaps = 1/460 (0%)
Strand = Plus / Minus
Query: 1 taaccacagagaacaacagaaggaaaactgaaggagcagaaaagaagccactggcgggag 60
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 660 taaccacagagaacaacagaaggaaaactgaagaagcagaaaagaagccactggcgggag 601
Query: 61 agatggttttaatcgccccagagccaaagagtaattggagtaactgtaattggtgattgt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 600 agatggttttaatcgccccagagccaaagagtaattggagtaactgtaattggtgattgt 541
Query: 121 ttgaggaacaatggatcgctgggacatgactgtaaaaagttgactacatatagttttgtg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 540 ttgaggaacaatggatcgctgggacatgactgtaaaaagttgactacatatagttttgtg 481
Query: 181 tttctcattaaacagag-aaaaaaattaaattaactaagtgctctactcaaaaaataagc 239
||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 480 tttctcattaaacagagaaaaaaaattaaattaactaagtgctctactcaaaaaacaagc 421
Query: 240 cggagcccccaaagtaaacatttaaacagctagaggaaagatctgaagataatgaattag 299
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 420 cggagcccccaaagtaaacatttaaacagctagaggaaagatctgaagataatgaattag 361
Query: 300 atggccgtgaattcaaaacaataagcctgcagtgtggacataaggaatccaagaatttgg 359
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 360 atggccgtgaattcaaaacaataagcctgcagtgtggacataaggaatccaagaatttgg 301
Query: 360 actttgtagagaatagcaactggttatgggacattttacttaatgactgaatactctaga 419
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 300 actttgtagagaatagcaactggttatgggacattttacttaatgactgaatactctaga 241
Query: 420 gaaacacaagaaaataaggagggagggggagatggggaga 459
||||||||||||||||||||||||||||||||||||||||
Sbjct: 240 gaaacacaagaaaataaggagggagggggagatggggaga 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 3
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 459
Length of database: 860
Length adjustment: 10
Effective length of query: 449
Effective length of database: 850
Effective search space: 381650
Effective search space used: 381650
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
