XXXXXXXXXXXXXXXXXXXXXXAATCAAGAACAGCGCGCGGAATCNTTGT
TTTACACATACCCGACTTTTAAATAGGGTTATTTGATTCGCTGGAGTCTA
ACTTCTTGAGCTCTTTGTCTATACTGGATATTAGCCCTCTATCATGTAGA
TGTAGGGTTGGTAAAGATCTTTTCCCAATCTGTTCATTGTCATTTTGTCC
TATTGACAGAAACTGGAAAGAACCCAGATGTCCTTCAAAATATGAATGGA
TACAGAAAATGTGGTACATTTACACAATGGAGTACTACTCAGTCATTAAA
AACAATGATTTTANTAAAGTCTTAGGCAAATGGATAAAACTAGAAAATAT
CATCCTGAGTGAGGTAACCCAATCACAAAAGAACACACATGATATGCACT
CACTGATAAGTGGATAATTAGCCCAGAAGTTTGGAATACTCAAGATACAA
TTCACAGACCACATGAAGCTCAAGAAGAAAGAAGACCAAAGTCCTTCAGT
CCTTCTTAGAAAGGGGATCAAAATACTCATGGGAGGGGATGCAGAGACAA
TGTGTGGAACAGAGAATGAAGAAAAGACCATTTAGAGACTGCTCCATCCA
GAGATTCATCTTATAGACAGTTATCAAGCCCAGACACTAGTGTGGATGCC
AACTAGTGCTTGCTAACAGGAGCCTGATATAGCTGTCTCCTGAGAAGCTC
TGCCAGTGCCTAATACAGAAGTGGATACTCACCGCCC

GGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXACACATGAAACAGCAAAACATTAATAATATGTTTT
CTAAAATCAAGAAAAATAATAACTTGAAAAATACAAAAGCTCCTAAGGCA
AGGCGGGAAACATACATTATAATTTATAGTCAAAATTCACCCATTATATA
ATTATTTTCTTAAAATCAATTTAAAGAAATTAGCAACTCAGCAGGATAAC
TTTGCAGGGAGTGTGAACATATGGGCAATGGTAAATAAGATATATCCTTT
TGAACATAAAATTCTGGTCAAGTTATCATAATATTTATATCATAAATTTC
ATAATATATAACAATAGCAAATTAAGTCATTTTAAAGCATATAGAAATAT
TCTGTTTTTCTGCTCCATTTTACTATAAACCTGTAATATTAGAAAACAGT
CTATTAATTCACATAAAACTATGCTGAGTCTGTCAGACTGGGAAAGGTCT
AGAGGTCTAATTACAAGCTGTGTGAGGAAAATTTCTGGGAAATAGAATTC
TTATACATGAAATGAGGGCAGAAAAATTGGTGTCATACTTAATCTTCTGT
AAGGGCAATTTGATTATATTTATCAAAATTAAAAATGTGTGCTCCTTTTG
CCCTAGAATTTTCCTTCCCAATATTTAATCCACAAATGTGATTATTTGCA
TCTAAAATTAATTATGTTGAAAGCTGTTCATTGACAGAGT

Query= MSMg01no478_i24.g1 MSMg01no478_i24.g1 CHROMAT_FILE:
MSMg01no478_i24.g1 PHD_FILE: MSMg01no478_i24.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:58:19 2005
         (638 letters)



>mm_chr6_78297063_78298100
          Length = 1038

 Score = 1176 bits (608), Expect = 0.0
 Identities = 611/612 (99%)
 Strand = Plus / Minus

                                                                       
Query: 1   acacatgaaacagcaaaacattaataatatgttttctaaaatcaagaaaaataataactt 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 612 acacatgaaacagcaaaacattaataatatgttttctaaaatcaagaaaaataataactt 553

                                                                       
Query: 61  gaaaaatacaaaagctcctaaggcaaggcgggaaacatacattataatttatagtcaaaa 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 552 gaaaaatacaaaagctcctaaggcaaggcgggaaacatacattataatttatagtcaaaa 493

                                                                       
Query: 121 ttcacccattatataattattttcttaaaatcaatttaaagaaattagcaactcagcagg 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 492 ttcacccattatataattattttcttaaaatcaatttaaagaaattagcaactcagcagg 433

                                                                       
Query: 181 ataactttgcagggagtgtgaacatatgggcaatggtaaataagatatatccttttgaac 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 432 ataactttgcagggagtgtgaacatatgggcaatggtaaataagatatatccttttgaac 373

                                                                       
Query: 241 ataaaattctggtcaagttatcataatatttatatcataaatttcataatatataacaat 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 372 ataaaattctggtcaagttatcataatatttatatcataaatttcataatatataactat 313

                                                                       
Query: 301 agcaaattaagtcattttaaagcatatagaaatattctgtttttctgctccattttacta 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 312 agcaaattaagtcattttaaagcatatagaaatattctgtttttctgctccattttacta 253

                                                                       
Query: 361 taaacctgtaatattagaaaacagtctattaattcacataaaactatgctgagtctgtca 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 252 taaacctgtaatattagaaaacagtctattaattcacataaaactatgctgagtctgtca 193

                                                                       
Query: 421 gactgggaaaggtctagaggtctaattacaagctgtgtgaggaaaatttctgggaaatag 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 192 gactgggaaaggtctagaggtctaattacaagctgtgtgaggaaaatttctgggaaatag 133

                                                                       
Query: 481 aattcttatacatgaaatgagggcagaaaaattggtgtcatacttaatcttctgtaaggg 540
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 132 aattcttatacatgaaatgagggcagaaaaattggtgtcatacttaatcttctgtaaggg 73

                                                                       
Query: 541 caatttgattatatttatcaaaattaaaaatgtgtgctccttttgccctagaattttcct 600
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 72  caatttgattatatttatcaaaattaaaaatgtgtgctccttttgccctagaattttcct 13

                       
Query: 601 tcccaatattta 612
           ||||||||||||
Sbjct: 12  tcccaatattta 1


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 36
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 638
Length of database: 1038
Length adjustment: 10
Effective length of query: 628
Effective length of database: 1028
Effective search space:   645584
Effective search space used:   645584
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)