Query= MSMg01no479_f24.b1 MSMg01no479_f24.b1 CHROMAT_FILE:
MSMg01no479_f24.b1 PHD_FILE: MSMg01no479_f24.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:59:21 2005
(367 letters)
>mm_chr6_91275680_91276445
Length = 766
Score = 630 bits (326), Expect = 0.0
Identities = 356/366 (97%), Gaps = 5/366 (1%)
Strand = Plus / Plus
Query: 1 attcctctgggg-tcgggtgatcctcctctgggtctctaagaactgtctgagcttgggat 59
|||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 attcctctggggct-gggtgatcctcctctgggtctctaagaactgtctgagcttgggat 259
Query: 60 ccc-agtaggaatggtgagggggaagttaagggctaggtgtgttgaggagcaatgcagta 118
||| | ||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 260 cccca-taggaatggtgagggggaagttaagggctaggtgtgttgaggagcaatgcaata 318
Query: 119 agacaataaatagtaggccttggatttaatccagagctcctgttgaccaggccatgtgct 178
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 319 agacaataaatagtaggccttggatttaatccagagctcctgttgaccaggccatgtgct 378
Query: 179 gagctcccatgcacccatctgcaaatgacccaaaaggcactgctctcaacctccctgttg 238
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 379 gagctcccatgcacccatctgcaaatgacccaaaaggcactgctctcaacctccctgttg 438
Query: 239 taccccacacagcacttcctttaaccagtgaggtctctttatttggtagcatactctggt 298
||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||
Sbjct: 439 taccccacacagcacttcctttaaccagtgaggtc-caaaatttggtagcatactctggt 497
Query: 299 ttgaatatgatctatccctttgaagtcatatgtaagtgggttgagaggtggtgggacttt 358
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 498 ttgaatatgatctatccctttgaagtcatatgtaagtgggttgagaggtggcgggacttt 557
Query: 359 gagagg 364
||||||
Sbjct: 558 gagagg 563
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 367
Length of database: 766
Length adjustment: 9
Effective length of query: 358
Effective length of database: 757
Effective search space: 271006
Effective search space used: 271006
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no479_f24.g1 MSMg01no479_f24.g1 CHROMAT_FILE:
MSMg01no479_f24.g1 PHD_FILE: MSMg01no479_f24.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:59:21 2005
(395 letters)
>mm_chr6_91475919_91476713
Length = 795
Score = 658 bits (340), Expect = 0.0
Identities = 374/392 (95%), Gaps = 12/392 (3%)
Strand = Plus / Minus
Query: 1 tctagcactggcctctttgctgaccttcagccagggtggtagtggtggtgagggatcctc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 tctagcactggcctctttgctgaccttcagccagggtggtagtggtggtgagggatcctc 506
Query: 61 actgctctgacagatcctcacagagcctatcatcctgagagacagactcccttaagatgg 120
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 actgctctgacagatcctcacagagcctatcatcctgagagacagactcccttaagatgc 446
Query: 121 tctgtcttctccctcctccttctccctcccttccttgcttcaggcccttagttggtcctg 180
|||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 tctg----------cctccttctccctcccttccttgcttcaggcccttagttggtcctg 396
Query: 181 ttgcagatcctggcacatggtaaacatctttgtaactctctggtgtggagtatgtgttca 240
||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 395 ttgcagatcctggcacatggtaaacatctttgttcctctctggtgtggagtatgtgttca 336
Query: 241 cgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgcttgcttggagaggtcggaggtttatgt 300
| ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 335 c--gtgtgtgtgtgtgtgtgtgtgtgtgtgtgcttgcttggagaggtcagaggtttatgt 278
Query: 301 tttatcattctccaccttattttttgagacagggtctctcaccgaacctgaggcttactg 360
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 277 tttatcattctccaccttattttttgagacagggtctctcactgaacctgaggcttactg 218
Query: 361 tctcagcaaaactagctagccagcaaactctg 392
|||||||||||||||||||||||||| |||||
Sbjct: 217 tctcagcaaaactagctagccagcaagctctg 186
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 395
Length of database: 795
Length adjustment: 9
Effective length of query: 386
Effective length of database: 786
Effective search space: 303396
Effective search space used: 303396
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
