GCTCATXXXXXXXXXXXXXXXXXXXXXXXXXXXXTTCAAGAAGATCCGCG
GAATTCAAAGTCTTTCTTCAAAGCAAGTTCCAGGACAGCCAACCTTAGCC
AGTGAAGGAGTTGGAAACCAGAACGCTGGTGATAATATAATAGAACAAAG
GGCCATGTTCCAGCCTAGTAAGCAACAGAACTCTGCAGCTTTGGCCATGT
GGCTCTGGCTTTAGAATCAAGAATAAAAGGAGTTACTGGAACAGTTGATG
CTGGTTAGCTGAAGCTAAGAAATTAGTGATGATTAAGAAGAGAGCAGCAG
CCGGGCGTGGTGGCGCACATCNTTAATCCCAGCACTCAGGAGGCAGAGGC
AGGTGGATTTCTGAGTTCGAGGCCAGCCTGGTCTACAAAGTGAGTTCCAG
GACAGCCAGGGCTATACAGAGAAGCCCTGTCTCAAAAAAACAAAAACAAA
AACAAAAAAAAAAAAAAGAAGAAGAAGAAGAAGAAGAAGAGAGCAGCATC
ACTGAGGTGAAATCTTCTGGAAAGTATTTTCTGAGAGCACAAAGAAGCTG
TGTTCCAGAGATAGCCAAGGTCGTGCCTCGTGCTGCAGCTAAACTTGGTG
ATGTATAAGAGTTACCCAAATGGTACTGGTTTTGAAGGCATAAAGGGGTC
CTAGAAAGTATCTGAGGCTTGGAACTGAAAGGCCAGGAAAGGCATTGGTA
AAGATGTATCCTCAGTTGCAGTTGATGTCCCAGGACTAAAGGGGTCATGC
AAAAAAN

CACGATGCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXAGCTGGAAATGTCCCTGAAGGAAAG
AAAGACTGGTTCCTCCTTCATTTGCTGCTTTCAGTTGACAATATTTAATG
GCTTCTTGCTGTCATTGCCCACGCCTACAAAAATTTTATTTTGTGTTTTT
GAATAAGTGCATCTGCACATTCCTGATTCTAGGGACAAGAGCCAAACCCC
AGTGTCCTACCTCCAACGTAAATCGCTGAGGCATTTCTACGGCTATTCTG
TCACAGTTGGGATTGTGGTTTTTGCTGTCACCAGATGAGAACTTCAGAAG
CAGCTGTCCATGGAGAGAAGAACAAGTGTGTACAAAATAGAGGAGTGTCC
AATTATGTGACAACCCCTCTGTAACAAAATTTTGTTTCAAATTTCTAAAA
AAGAAAAAAGAAAGAAACAGGAATATCAGGGTAATGCTACAAAAACCAAA
GTATTATCCCTGAGCAAGAAGGATTTATCAAACCCCCCAAAAAATATTAA
ATAAAATAGAACACTGGGGACCGGACTGTTCTAGATTAAAGAAAATTAGA
TATTTCTTTTTTAATCTAACGAGCACTTGGAAGATGATTACAAGGGAAAA
GACACTTACCACTGAGCCTGACAATCTGAATTCCATCCCAGGACCCATGT
GATTGAAGGAAAGAAGCAATTCCTGCAAGCTGTCCTCTGTCTCCACACAT
ATACCATG

Query= MSMg01no479_o13.g1 MSMg01no479_o13.g1 CHROMAT_FILE:
MSMg01no479_o13.g1 PHD_FILE: MSMg01no479_o13.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:00:04 2005
         (683 letters)



>mm_chr6_64929279_64930361
          Length = 1083

 Score = 1282 bits (663), Expect = 0.0
 Identities = 678/687 (98%), Gaps = 8/687 (1%)
 Strand = Plus / Plus

                                                                       
Query: 1   agctggaaatgtccctgaaggaaagaaagactggttcctccttcatttgctgctttcagt 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 agctggaaatgtccctgaaggaaagaaagactggttcctccttcatttgctgctttcagt 260

                                                                       
Query: 61  tgacaatatttaatggcttcttgctgtcattgcccacgcctacaaaaattttattttgtg 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tgacaatatttaatggcttcttgctgtcattgcccacgcctacaaaaattttattttgtg 320

                                                                       
Query: 121 tttttgaataagtgcatctgcacattcctgattctagggacaagagccaaaccccagtgt 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tttttgaataagtgcatctgcacattcctgattctagggacaagagccaaaccccagtgt 380

                                                                       
Query: 181 cctacctccaacgtaaatcgctgaggcatttctacggctattctgtcacagttgggattg 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 cctacctccaacgtaaatcgctgaggcatttctacggctattctgtcacagttgggattg 440

                                                                       
Query: 241 tgg----tttttgctgtcaccagatgagaacttcagaagcagctgtccatggagagaaga 296
           |||    |    ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 tggggcct----gctgtcaccagatgagaacttcagaagcagctgtccatggagagaaga 496

                                                                       
Query: 297 acaagtgtgtacaaaatagaggagtgtccaattatgtgacaacccctctgtaacaaaatt 356
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 497 acaagtgtgtacaaaatagaggagtgtccaattatgtgacaacccctctgtaacaaaatt 556

                                                                       
Query: 357 ttgtttcaaatttctaaaaaagaaaaaagaaagaaacaggaatatcagggtaatgctaca 416
           |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 557 ttgtttcaaatttctaaaaaggaaaaaagaaagaaacaggaatatcagggtaatgctaca 616

                                                                       
Query: 417 aaaaccaaagtattatccctgagcaagaaggatttatcaaaccccccaaaaaatattaaa 476
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 617 aaaaccaaagtattatccctgagcaagaaggatttatcaaaccccccaaaaaatattaaa 676

                                                                       
Query: 477 taaaatagaacactggggaccggactgttctagattaaagaaaattagatatttcttttt 536
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 677 taaaatagaacactggggaccggactgttctagattaaagaaaattagatatttcttttt 736

                                                                       
Query: 537 taatctaacgagcacttggaagatgattacaagggaaaagacacttaccactgagcctga 596
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 737 taatctaacgagcacttggaagatgattacaagggaaaagacacttaccactgagcctga 796

                                                                       
Query: 597 caatctgaattccatcccaggacccatgtgattgaaggaaagaagcaattcctgcaagct 656
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 797 caatctgaattccatcccaggacccatgtgattgaaggaaagaagcaattcctgcaagct 856

                                      
Query: 657 gtcctctgtctccacacatataccatg 683
           |||||||||||||||||||||||||||
Sbjct: 857 gtcctctgtctccacacatataccatg 883


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 34
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 683
Length of database: 1083
Length adjustment: 10
Effective length of query: 673
Effective length of database: 1073
Effective search space:   722129
Effective search space used:   722129
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)