Query= MSMg01no480_k17.b1 MSMg01no480_k17.b1 CHROMAT_FILE:
MSMg01no480_k17.b1 PHD_FILE: MSMg01no480_k17.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:01:03 2005
(383 letters)
>mm_chr6_76086962_76087744
Length = 783
Score = 725 bits (375), Expect = 0.0
Identities = 378/379 (99%)
Strand = Plus / Minus
Query: 2 tggaaaataaaaggttactttgacgatacgttaatgtgcagttatctcataaatgtatgt 61
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 379 tggaaaataaaaggttactttgacgatatgttaatgtgcagttatctcataaatgtatgt 320
Query: 62 atctcacttggctgctgataataaagccctaataattttatttaatggatgtactcacct 121
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 319 atctcacttggctgctgataataaagccctaataattttatttaatggatgtactcacct 260
Query: 122 aattactataaaaatatcttagaaaatgaaggatagtgaatataaactatgagtaacata 181
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 259 aattactataaaaatatcttagaaaatgaaggatagtgaatataaactatgagtaacata 200
Query: 182 ccctccagaagatatatggcaatatctgaaagtattgcttcaactaggagaaagaggttg 241
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 199 ccctccagaagatatatggcaatatctgaaagtattgcttcaactaggagaaagaggttg 140
Query: 242 ataactggcatcattgagtagaggtcagagatgcctccaagcacttgtaaaagttctgga 301
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 139 ataactggcatcattgagtagaggtcagagatgcctccaagcacttgtaaaagttctgga 80
Query: 302 cattacaaaatcaacagtgtcactctgaaaaaaatccacacaatgtctattattgccatt 361
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 79 cattacaaaatcaacagtgtcactctgaaaaaaatccacacaatgtctattattgccatt 20
Query: 362 gctcttggttaaacatttt 380
|||||||||||||||||||
Sbjct: 19 gctcttggttaaacatttt 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 383
Length of database: 783
Length adjustment: 9
Effective length of query: 374
Effective length of database: 774
Effective search space: 289476
Effective search space used: 289476
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no480_k17.g1 MSMg01no480_k17.g1 CHROMAT_FILE:
MSMg01no480_k17.g1 PHD_FILE: MSMg01no480_k17.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:01:03 2005
(302 letters)
>mm_chr6_75926229_75926929
Length = 701
Score = 561 bits (290), Expect = e-164
Identities = 299/302 (99%), Gaps = 1/302 (0%)
Strand = Plus / Plus
Query: 1 ttcactatgtagccctggctgtcctgtaactcactctgtagacaaggctggcctagaact 60
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 201 ttcactatgtagccctggctgtcctggaactcactctgtagacaaggctggcctagaact 260
Query: 61 aagaaatctgcctgcttctgcctcccaagtgctaggattaaaggcatgcagcaccactgc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 aagaaatctgcctgcttctgcctcccaagtgctaggattaaaggcatgcagcaccactgc 320
Query: 121 ctggctttgctgtttattttaaatgaaaaaaaaatgtttacctatgtttatgtatgcttt 180
||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||
Sbjct: 321 ctggctttgctgtttattttaaatg-aaacaaaatgtttacctatgtttatgtatgcttt 379
Query: 181 tatattgctgtttatttttagtgaaaatgtttgtctttatgtcatagtatgaatcagtaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 380 tatattgctgtttatttttagtgaaaatgtttgtctttatgtcatagtatgaatcagtaa 439
Query: 241 ggttccccaagctctgatcatcaatatatggtccttttggaaggtagtggtatctttaga 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 440 ggttccccaagctctgatcatcaatatatggtccttttggaaggtagtggtatctttaga 499
Query: 301 aa 302
||
Sbjct: 500 aa 501
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 302
Length of database: 701
Length adjustment: 9
Effective length of query: 293
Effective length of database: 692
Effective search space: 202756
Effective search space used: 202756
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
