Query= MSMg01no481_p15.b1 MSMg01no481_p15.b1 CHROMAT_FILE:
MSMg01no481_p15.b1 PHD_FILE: MSMg01no481_p15.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:02:47 2005
(319 letters)
>mm_chr6_148438739_148439458
Length = 720
Score = 319 bits (165), Expect = 1e-91
Identities = 264/311 (84%), Gaps = 31/311 (9%)
Strand = Plus / Plus
Query: 10 aattcttaagtgttca-tgtgaagtgttgtggctggctgtgactcttattttcttagatt 68
|||||||||||| || ||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 210 aattcttaagtgaccactgtgaagtgttgtggctggttgtgactcttattttcttagatt 269
Query: 69 gaaaactactaaaagttggtgaaaatgctaagactaaaggggaagccagtgataaaagaa 128
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 270 ggaaactactaaaagttggtgaaaatgctaagactaaaggggaagccagtgataaaagaa 329
Query: 129 agg------------------gtcttttttagtatatggagcgatagggaaaagatagat 170
||| || ||||||||||||||||| ||||||||||||| ||||
Sbjct: 330 aggtttttcttttgtttgtttgt-ttttttagtatatggagtgatagggaaaagagagat 388
Query: 171 gatagatatagatagatagatagatagatagatagatagatagatagatagataaataga 230
||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 389 gatagatataggtagatagatagatagatagatagatagatagatagatagatagataga 448
Query: 231 ta-----gatgatagatagagatagtc-tgagatagatagacatagatgatagatagata 284
|| || |||||||| | | || | | ||| ||||||||||| || | ||| ||| |
Sbjct: 449 tatgacaga-gatagata-a-acagacat-agacagatagacatacat-acagacagaca 503
Query: 285 gatagatagat 295
|||||| ||||
Sbjct: 504 gatagacagat 514
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 53
Number of extensions: 22
Number of successful extensions: 22
Number of sequences better than 10.0: 1
Number of HSP's gapped: 19
Number of HSP's successfully gapped: 1
Length of query: 319
Length of database: 720
Length adjustment: 9
Effective length of query: 310
Effective length of database: 711
Effective search space: 220410
Effective search space used: 220410
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no481_p15.g1 MSMg01no481_p15.g1 CHROMAT_FILE:
MSMg01no481_p15.g1 PHD_FILE: MSMg01no481_p15.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:02:47 2005
(674 letters)
>mm_chr6_148603902_148604975
Length = 1074
Score = 611 bits (316), Expect = e-179
Identities = 325/328 (99%)
Strand = Plus / Minus
Query: 347 tcagaattccagcttatatagaagtggaaacacctatccttgtgcagcactgaacaatta 406
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 1074 tcagaattccagcttatatagaagtggaaacacctatccttgtgtagcactgaacaatta 1015
Query: 407 ctagatttttggacttcccactcacagctgccaattgttggataagttgaattgcagact 466
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1014 ctagatttttggacttcccactcacagctgccaattgttggataagttgaattgcagact 955
Query: 467 gtaaatcatcccaataaattaccttaatatataaatacattccataagttctgtgactct 526
||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |||
Sbjct: 954 gtaaatcatcccaataaattaccttaatatatagatacattccataagttctgtgattct 895
Query: 527 agagagccctgtctaatacaacaatctatatagactacatggataccaacttagttccat 586
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 894 agagagccctgtctaatacaacaatctatatagactacatggataccaacttagttccat 835
Query: 587 cgcctagatgttgtaaaaaatgtttagatcttcctccaacatggtcttaaaaggaaatgg 646
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 834 cgcctagatgttgtaaaaaatgtttagatcttcctccaacatggtcttaaaaggaaatgg 775
Query: 647 acattgctcagtatggtctcttccctcc 674
||||||||||||||||||||||||||||
Sbjct: 774 acattgctcagtatggtctcttccctcc 747
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 674
Length of database: 1074
Length adjustment: 10
Effective length of query: 664
Effective length of database: 1064
Effective search space: 706496
Effective search space used: 706496
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
