Query= MSMg01no484_a20.b1 MSMg01no484_a20.b1 CHROMAT_FILE:
MSMg01no484_a20.b1 PHD_FILE: MSMg01no484_a20.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:05:28 2005
(673 letters)
>mm_chr6_74159901_74160974
Length = 1074
Score = 1122 bits (580), Expect = 0.0
Identities = 611/622 (98%), Gaps = 4/622 (0%)
Strand = Plus / Minus
Query: 55 tggtggtacatgcttttttgataaaggagacagaactc-ggggacagaggcaagcagatc 113
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 1074 tggtggtacatgcttttttgataaaggagacagaactcgggggacagaggcaagcagatc 1015
Query: 114 tgtgtgttctaagtcagtgagctcatttgagtcactgagtggagaggcagtgcagtggag 173
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1014 tgtgtgttctaagtcagtgagctcatttgagtcactgagtggagaggcagtgcagtggag 955
Query: 174 ttggtgacagctcagtttgtgaacttcagaggctgtttttacaggggcagttttatagag 233
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 954 ttggtgacagctcagtttgtgaacttcagaggctgtttttacgggggcagttttatagag 895
Query: 234 acaggttgcagagagagcaattatagtaagaaattcttgtataatacattgactctataa 293
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 894 acaggttgcagagagagtaattatagtaagaaattcttgtataatacattgactctataa 835
Query: 294 cagaactaattctttctatgtgaaatattaatataagtgtatactgtaggtgaatgctct 353
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 834 cagaactaattctttctatgtgaaatattaatataactgtatactgtaggtgaatgctct 775
Query: 354 ttaagatacaatcagatgacactgtatgtcatctttaactacagttttacattaatcaag 413
||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 774 ttaagatacaatcggatgatactgtatgtcatctttaactacagttttacattaatcaag 715
Query: 414 cattcctatgttatataaatgtttgaacatacatttgtgtgtgtatttgtgtgagtttcc 473
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 714 cattcctatgttatataaatgtttgaacatacatttgtgtgtgtatttgtgtgagtttcc 655
Query: 474 aagtctatatactgatccttgtgacccgactttgtcctagaacttgctatttagtccttc 533
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 654 aagtctatatactgatccttgtgacccgactttgtcctagaacttgctatttagtccttc 595
Query: 534 atattaaaagcagaatgaccaaagctattgtttcaagtag--tttttttaattggaaaaa 591
|||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||
Sbjct: 594 atattaaaagcagaatgaccaaagctattgtttcaagtagtttttttttaattgg-aaaa 536
Query: 592 atagactaaattattccctatcttcagaagatattaccctagttgacttctgtgtctgca 651
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 535 atagactaaattattccctatcttcagaagatattaccctagttgacttctgtgtctgcc 476
Query: 652 tgcattcttcctgaaaatttat 673
| ||||||||||||||||||||
Sbjct: 475 tacattcttcctgaaaatttat 454
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 673
Length of database: 1074
Length adjustment: 10
Effective length of query: 663
Effective length of database: 1064
Effective search space: 705432
Effective search space used: 705432
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no484_a20.g1 MSMg01no484_a20.g1 CHROMAT_FILE:
MSMg01no484_a20.g1 PHD_FILE: MSMg01no484_a20.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:05:28 2005
(646 letters)
>mm_chr6_74074020_74075065
Length = 1046
Score = 1180 bits (610), Expect = 0.0
Identities = 636/646 (98%), Gaps = 3/646 (0%)
Strand = Plus / Plus
Query: 1 aaagtatcttcatatctcaatatctttgtgttattattttacatgagtgctggggatctg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 204 aaagtatcttcatatctcaatatctttgtgttattattttacatgagtgctggagatctg 263
Query: 61 aactcaggtgctgcaaacaccttatcaggtgagccatctcctcagtatggaaaaaaaatt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 264 aactcaggtgctgcaaacaccttatcaggtgagccatctcctcagtatggaaaaa---tt 320
Query: 121 cacttattaattattactaagaatatctgtatgtggttgtgtggttggctttaagaatgc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 cacttattaattattactaagaatatctgtatgtggttgtgtggttggctttaagaatgc 380
Query: 181 acagataagacattgctcacaacctcatcaggaaaaagcaaaaatacaaatacattacag 240
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 381 acagataagacattgctcacaacctcatcaggaaaaagcaaaaagacaaatacattacag 440
Query: 241 tgagtgaaatggaattcatctgcctaagcaggccaaataaaaacaaagctcacgaatgaa 300
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 441 tgagtgaaatggaattcatctgcctaagcaggccaaataaaaacaaagctcaagaatgaa 500
Query: 301 tggacagtaacttaagttctttccacttccactttgtttctcagattatttttcagcatc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 tggacagtaacttaagttctttccacttccactttgtttctcagattatttttcagcatc 560
Query: 361 atcaggtctttccatctacatttaaaatcttcccccatctccatcccactgtgttttttc 420
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 atcaggtctttcaatctacatttaaaatcttcccccatctccatcccactgtgttttttc 620
Query: 421 catactagaaaatgggtggcactaactttccatttatagtataccagctgaatgtactta 480
||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||
Sbjct: 621 catactagaaaatgggtggcactaactttccatttatagtataccagatgaatgcactta 680
Query: 481 ttaaacacaacatattagaaaatgcaggaataaaagtatttttcaagtcatgcatctttt 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 ttaaacacaacatattagaaaatgcaggaataaaagtatttttcaagtcatgcatctttt 740
Query: 541 ctttctactggccaataatctaggtttttaccatccatgtcacaaacctatatcaatgta 600
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 cttcctactggccaataatctaggtttttaccatccatgtcacaaacctatatcaatgta 800
Query: 601 ctccattttacagtttgtgagctaaattcacaagtttttaaaagca 646
||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 801 ctccattttacagtttgtgagctaaattcacaagtttttaaaagca 846
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 646
Length of database: 1046
Length adjustment: 10
Effective length of query: 636
Effective length of database: 1036
Effective search space: 658896
Effective search space used: 658896
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
