MoG+ -Mouse Genome database with high added value-

BAC Information

BAC name
Region	Chromosome -
Gene	search by nearby gene name.
Format	rows / page	Page	1

BAC

Clone Name	MSMg01-485A13
Chromosome	6 (Build37)
Map Location	88,699,229 - 88,699,804
singlet/doublet	singlet
Overlap gene	Mgll
Upstream gene	LOC100043118, EG545864, Gp9, Rab43, Isy1, Cnbp, Copg, 8430410A17Rik, LOC665416, H1fx, EG434064, LOC100043131, Rab7, Rpn1, Gata2, Dnajb8, Eefsec, Ruvbl1, Sec61a1, 4933428M03Rik
Downstream gene	Abtb1, Podxl2, LOC100043146, Mcm2, Gpr175, 4933427D06Rik, Gm1965, LOC100043153, LOC100043159, EG624483, EG624491, LOC665547, EG624537, Gm839, 4930512J16Rik, Plxna1, Chchd6, Txnrd3, V1r-ps1, V1rb7, V1rb9
Link	Open Mouse BAC browser

Click to get alignment info.

name	LOC100043118 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100043118
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST

name	EG545864 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:545864 MGI:3647624
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 10 mRNAs, 2630 ESTs, 8 Proteins

name	Gp9 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:54368 MGI:1860137
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Rab43 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:69834 MGI:1917084
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 2 mRNAs

name	Isy1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:57905 MGI:1923310
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Cnbp (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:12785 MGI:88431
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Copg (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:54161 MGI:1858696
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 2 mRNAs

name	8430410A17Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:232210 MGI:1914053
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC665416 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:665416
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 5 ESTs, 6 Proteins pseudo : _no_value

name	H1fx (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:243529 MGI:2685307
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	EG434064 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:434064 MGI:3648213
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 1 EST

name	LOC100043131 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100043131
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST

name	Rab7 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:19349 MGI:105068
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Rpn1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:103963 MGI:98084
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Gata2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:14461 MGI:95662
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Dnajb8 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:56691 MGI:1922801
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Eefsec (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:65967 MGI:2137092
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Ruvbl1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:56505 MGI:1928760
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Sec61a1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:53421 MGI:1858417
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	4933428M03Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:74589 MGI:1918481
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Mgll (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:23945 MGI:1346042
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Abtb1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:80283 MGI:1933148
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Podxl2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:319655 MGI:2442488
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100043146 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100043146
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 Proteins pseudo : _no_value

name	Mcm2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:17216 MGI:105380
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Gpr175 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:24100 MGI:1345190
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	4933427D06Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:232217 MGI:3026922
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Gm1965 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:434065 MGI:3584270
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100043153 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100043153
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 Protein pseudo : _no_value

name	LOC100043159 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100043159
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 Protein

name	EG624483 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:624483 MGI:3645279
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST

name	EG624491 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:624491 MGI:3645511
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST, 1 Protein

name	LOC665547 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:665547
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 Proteins pseudo : _no_value

name	EG624537 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:624537 MGI:3645589
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST, 1 Protein

name	Gm839 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:330379 MGI:2685685
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	4930512J16Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:75131 MGI:1922381
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 2 ESTs

name	Plxna1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:18844 MGI:107685
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Chchd6 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:66098 MGI:1913348
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Txnrd3 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:232223 MGI:2386711
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	V1r-ps1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:113869 MGI:2148531
definition	note : vomeronasal 1 receptor, pseudogene 1 pseudo : _no_value

name	V1rb7 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:113855 MGI:2148518
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	V1rb9 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:113857 MGI:2148520
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100043118 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149255233 GeneID:100043118
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST product : similar to coiled-coil domain containing 48 transcript_id : XM_001479529.1

name	Gp9 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:9055225 GeneID:54368 MGI:1860137
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : glycoprotein 9 (platelet) transcript_id : NM_018762.1

name	Rab43 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:86476068 GeneID:69834 MGI:1917084
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RAB43, member RAS oncogene family transcript_id : NM_001039394.1

name	Rab43 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:86476067 GeneID:69834 MGI:1917084
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RAB43, member RAS oncogene family transcript_id : NM_133717.2

name	Isy1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142372613 GeneID:57905 MGI:1923310
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : ISY1 splicing factor homolog (S. cerevisiae) transcript_id : NM_133934.3

name	Cnbp (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:42476048 GeneID:12785 MGI:88431
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : cellular nucleic acid binding protein transcript_id : NM_013493.2

name	Copg (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:118130780 GeneID:54161 MGI:1858696
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : coatomer protein complex, subunit gamma transcript_id : NM_017477.2

name	Copg (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:47059162 GeneID:54161 MGI:1858696
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : coatomer protein complex, subunit gamma transcript_id : NM_201244.1

name	8430410A17Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:31343454 GeneID:232210 MGI:1914053
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA 8430410A17 gene transcript_id : NM_173737.2

name	H1fx (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:38348565 GeneID:243529 MGI:2685307
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : H1 histone family, member X transcript_id : NM_198622.1

name	EG434064 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149255236 GeneID:434064 MGI:3648213
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 1 EST product : predicted gene, EG434064 transcript_id : XM_976858.2

name	LOC100043131 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149255237 GeneID:100043131
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST product : hypothetical protein LOC100043131 transcript_id : XM_001479559.1

name	Rab7 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:6679598 GeneID:19349 MGI:105068
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RAB7, member RAS oncogene family transcript_id : NM_009005.1

name	Rpn1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:141802696 GeneID:103963 MGI:98084
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : ribophorin I transcript_id : NM_133933.3

name	Gata2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142378318 GeneID:14461 MGI:95662
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : GATA binding protein 2 transcript_id : NM_008090.4

name	Dnajb8 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:9910415 GeneID:56691 MGI:1922801
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : DnaJ (Hsp40) homolog, subfamily B, member 8 transcript_id : NM_019964.1

name	Eefsec (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:111038122 GeneID:65967 MGI:2137092
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : eukaryotic elongation factor, selenocysteine-tRNA-specific transcript_id : NM_023060.3

name	Ruvbl1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:134053923 GeneID:56505 MGI:1928760
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RuvB-like protein 1 transcript_id : NM_019685.2

name	Sec61a1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142387803 GeneID:53421 MGI:1858417
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : Sec61 alpha 1 subunit (S. cerevisiae) transcript_id : NM_016906.3

name	4933428M03Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:21312803 GeneID:74589 MGI:1918481
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA 4933428M03 gene transcript_id : NM_029013.1

name	Mgll (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:31982751 GeneID:23945 MGI:1346042
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : monoglyceride lipase transcript_id : NM_011844.3

name	Abtb1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142365947 GeneID:80283 MGI:1933148
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : ankyrin repeat and BTB (POZ) domain containing 1 transcript_id : NM_030251.2

name	Podxl2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:31542456 GeneID:319655 MGI:2442488
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : podocalyxin-like 2 transcript_id : NM_176973.3

name	Mcm2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:6678825 GeneID:17216 MGI:105380
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : minichromosome maintenance deficient 2 mitotin (S. cerevisiae) transcript_id : NM_008564.1

name	Gpr175 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:114326470 GeneID:24100 MGI:1345190
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : G protein-coupled receptor 175 transcript_id : NM_011906.2

name	4933427D06Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:124378057 GeneID:232217 MGI:3026922
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA 4933427D06 gene transcript_id : NM_175017.3

name	Gm1965 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:141801784 GeneID:434065 MGI:3584270
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : gene model 1965, (NCBI) transcript_id : NM_001033491.2

name	LOC100043159 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149255239 GeneID:100043159
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 Protein product : hypothetical protein LOC100043159 transcript_id : XM_001479648.1

name	EG624483 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149255241 GeneID:624483 MGI:3645279
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST product : predicted gene, EG624483 transcript_id : XM_889034.3

name	EG624491 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149255243 GeneID:624491 MGI:3645511
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST, 1 Protein product : predicted gene, EG624491 transcript_id : XM_889044.3

name	EG624537 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149255245 GeneID:624537 MGI:3645589
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST, 1 Protein product : predicted gene, EG624537 transcript_id : XM_889083.3

name	Gm839 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:41235726 GeneID:330379 MGI:2685685
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : gene model 839, (NCBI) transcript_id : NM_201356.1

name	4930512J16Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149255354 GeneID:75131 MGI:1922381
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 2 ESTs product : RIKEN cDNA 4930512J16 gene transcript_id : XM_001480366.1

name	Plxna1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:6679388 GeneID:18844 MGI:107685
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : plexin A1 transcript_id : NM_008881.1

name	Chchd6 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:27754145 GeneID:66098 MGI:1913348
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : coiled-coil-helix-coiled-coil-helix domain containing 6 transcript_id : NM_025351.2

name	Txnrd3 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:110735448 GeneID:232223 MGI:2386711
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : thioredoxin reductase 3 transcript_id : NM_153162.3

name	V1rb7 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:16716538 GeneID:113855 MGI:2148518
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : vomeronasal 1 receptor, B7 transcript_id : NM_053228.1

name	V1rb9 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:16716542 GeneID:113857 MGI:2148520
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : vomeronasal 1 receptor, B9 transcript_id : NM_053230.1

name	LOC100043118 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149255234 GeneID:100043118
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001479579.1

name	Gp9 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:9055226 CCDS:CCDS20328.1 GeneID:54368 MGI:1860137
definition	GO_component : GO:0005578 - extracellular matrix (sensu Metazoa) [Evidence IEA] GO_function : GO:0016740 - transferase activity [Evidence IEA] codon_start : 1 note : platelet glycoprotein IX product : glycoprotein 9 (platelet) protein_id : NP_061232.1

name	Rab43 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:86476069 CCDS:CCDS20329.1 GeneID:69834 MGI:1917084
definition	GO_component : GO:0000178 - exosome (RNase complex) [Evidence IEA]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0005525 - GTP binding [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA] GO_process : GO:0006886 - intracellular protein transport [Evidence IEA]; GO:0015031 - protein transport [Evidence IEA]; GO:0007264 - small GTPase mediated signal transduction [Evidence IEA] codon_start : 1 note : isoform a is encoded by transcript variant 1 product : RAB43, member RAS oncogene family isoform a protein_id : NP_001034483.1

name	Rab43 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:21746181 CCDS:CCDS20330.1 GeneID:69834 MGI:1917084
definition	GO_component : GO:0000178 - exosome (RNase complex) [Evidence IEA]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0005525 - GTP binding [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA] GO_process : GO:0006886 - intracellular protein transport [Evidence IEA]; GO:0015031 - protein transport [Evidence IEA]; GO:0007264 - small GTPase mediated signal transduction [Evidence IEA] codon_start : 1 note : isoform b is encoded by transcript variant 2 product : RAB43, member RAS oncogene family isoform b protein_id : NP_598478.1

name	Isy1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:20149316 GeneID:57905 MGI:1923310
definition	GO_component : GO:0005634 - nucleus [Evidence IEA]; GO:0005681 - spliceosome complex [Evidence IEA] GO_process : GO:0006397 - mRNA processing [Evidence IEA]; GO:0000398 - nuclear mRNA splicing, via spliceosome [Evidence IEA] codon_start : 1 product : ISY1 splicing factor homolog protein_id : NP_598695.1

name	Cnbp (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:7304969 GeneID:12785 MGI:88431
definition	GO_component : GO:0005829 - cytosol [Evidence IDA]; GO:0005783 - endoplasmic reticulum [Evidence IDA]; GO:0005634 - nucleus [Evidence IDA] GO_function : GO:0003677 - DNA binding [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0003676 - nucleic acid binding [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA] GO_process : GO:0008284 - positive regulation of cell proliferation [Evidence IDA]; GO:0045944 - positive regulation of transcription from RNA polymerase II promoter [Evidence IDA]; GO:0006355 - regulation of transcription, DNA-dependent [Evidence IEA]; GO:0006350 - transcription [Evidence IEA] codon_start : 1 note : cellular nucleic acid binding protein 1 product : cellular nucleic acid binding protein protein_id : NP_038521.1

name	Copg (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:8567338 GeneID:54161 MGI:1858696
definition	GO_component : GO:0019028 - viral capsid [Evidence IEA] GO_function : GO:0005488 - binding [Evidence IEA]; GO:0005198 - structural molecule activity [Evidence IEA] codon_start : 1 note : isoform 1 is encoded by transcript variant 1; coatomer protein complex, subunit gamma 1 product : coatomer protein complex, subunit gamma isoform 1 protein_id : NP_059505.1

name	Copg (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:47059163 GeneID:54161 MGI:1858696
definition	GO_component : GO:0019028 - viral capsid [Evidence IEA] GO_function : GO:0005488 - binding [Evidence IEA]; GO:0005198 - structural molecule activity [Evidence IEA] codon_start : 1 note : isoform 2 is encoded by transcript variant 2; coatomer protein complex, subunit gamma 1 product : coatomer protein complex, subunit gamma isoform 2 protein_id : NP_957696.1

name	8430410A17Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:30424571 GeneID:232210 MGI:1914053
definition	codon_start : 1 product : hypothetical protein LOC232210 protein_id : NP_776098.1

name	H1fx (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:38348566 CCDS:CCDS20331.1 GeneID:243529 MGI:2685307
definition	GO_component : GO:0000786 - nucleosome [Evidence IEA]; GO:0005634 - nucleus [Evidence IEA] GO_function : GO:0003677 - DNA binding [Evidence IEA] GO_process : GO:0007275 - development [Evidence IEA]; GO:0006334 - nucleosome assembly [Evidence IEA] codon_start : 1 product : H1 histone family, member X protein_id : NP_941024.1

name	EG434064 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:94377989 GeneID:434064 MGI:3648213
definition	codon_start : 1 product : hypothetical protein protein_id : XP_981952.1

name	LOC100043131 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149255238 GeneID:100043131
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001479609.1

name	Rab7 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6679599 GeneID:19349 MGI:105068
definition	GO_component : GO:0005794 - Golgi apparatus [Evidence IDA]; GO:0005770 - late endosome [Evidence IDA] [Evidence ISS]; GO:0005764 - lysosome [Evidence ISS]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0005525 - GTP binding [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA] GO_process : GO:0006886 - intracellular protein transport [Evidence TAS]; GO:0015031 - protein transport [Evidence IEA]; GO:0007264 - small GTPase mediated signal transduction [Evidence IEA]; GO:0006810 - transport [Evidence IEA] codon_start : 1 exception : mismatches in translation product : RAB7, member RAS oncogene family protein_id : NP_033031.1

name	Rpn1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:31543605 CCDS:CCDS20332.1 GeneID:103963 MGI:98084
definition	GO_component : GO:0005789 - endoplasmic reticulum membrane [Evidence IDA]; GO:0016020 - membrane [Evidence IEA] GO_process : GO:0006486 - protein amino acid glycosylation [Evidence IEA] codon_start : 1 exception : mismatches in translation product : ribophorin I protein_id : NP_598694.2

name	Gata2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:31982351 CCDS:CCDS20333.1 GeneID:14461 MGI:95662
definition	GO_component : GO:0005634 - nucleus [Evidence IEA] GO_function : GO:0003677 - DNA binding [Evidence IDA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0043565 - sequence-specific DNA binding [Evidence IEA]; GO:0003700 - transcription factor activity [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA] GO_process : GO:0030154 - cell differentiation [Evidence IMP]; GO:0048469 - cell maturation [Evidence IMP]; GO:0030182 - neuron differentiation [Evidence IMP]; GO:0006909 - phagocytosis [Evidence IEA]; GO:0021983 - pituitary gland development [Evidence IMP]; GO:0050766 - positive regulation of phagocytosis [Evidence ISS]; GO:0006355 - regulation of transcription, DNA-dependent [Evidence IEA]; GO:0006350 - transcription [Evidence IEA] codon_start : 1 exception : mismatches in translation note : GATA-binding protein 2 product : GATA binding protein 2 protein_id : NP_032116.3

name	Dnajb8 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:9910416 CCDS:CCDS20334.1 GeneID:56691 MGI:1922801
definition	GO_function : GO:0031072 - heat shock protein binding [Evidence IEA] GO_process : GO:0006457 - protein folding [Evidence IEA] codon_start : 1 note : DnaJ homolog 6 product : DnaJ homolog, subfamily B, member 8 protein_id : NP_064348.1

name	Eefsec (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:12746442 CCDS:CCDS20335.1 GeneID:65967 MGI:2137092
definition	GO_component : GO:0005634 - nucleus [Evidence IEA] GO_function : GO:0005525 - GTP binding [Evidence IDA]; GO:0000166 - nucleotide binding [Evidence IEA]; GO:0003746 - translation elongation factor activity [Evidence IEA]; GO:0003743 - translation initiation factor activity [Evidence IEA]; GO:0000049 - tRNA binding [Evidence IDA] GO_process : GO:0006412 - protein biosynthesis [Evidence IEA]; GO:0001514 - selenocysteine incorporation [Evidence IMP] [Evidence IDA] codon_start : 1 note : MJ0495-like protein SelB product : eukaryotic elongation factor, selenocysteine-tRNA-specific protein_id : NP_075547.1

name	Ruvbl1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:9790083 CCDS:CCDS20336.1 GeneID:56505 MGI:1928760
definition	GO_component : GO:0005634 - nucleus [Evidence IEA] GO_function : GO:0005524 - ATP binding [Evidence IEA]; GO:0003678 - DNA helicase activity [Evidence IEA]; GO:0004386 - helicase activity [Evidence IEA]; GO:0016787 - hydrolase activity [Evidence IEA]; GO:0017111 - nucleoside-triphosphatase activity [Evidence IEA] GO_process : GO:0016568 - chromatin modification [Evidence IEA]; GO:0006310 - DNA recombination [Evidence IEA]; GO:0001558 - regulation of cell growth [Evidence IEA]; GO:0006355 - regulation of transcription, DNA-dependent [Evidence IEA]; GO:0006350 - transcription [Evidence IEA] codon_start : 1 note : Pontin 52 product : RuvB-like protein 1 protein_id : NP_062659.1

name	Sec61a1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:8394252 GeneID:53421 MGI:1858417
definition	GO_component : GO:0005783 - endoplasmic reticulum [Evidence IEA]; GO:0016021 - integral to membrane [Evidence IEA]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0015450 - protein translocase activity [Evidence IEA] GO_process : GO:0009306 - protein secretion [Evidence IEA]; GO:0006605 - protein targeting [Evidence IEA]; GO:0015031 - protein transport [Evidence IEA]; GO:0006810 - transport [Evidence IEA] codon_start : 1 note : transport protein sec61 alpha subunit; SEC61, alpha subunit product : Sec61 alpha subunit homolog protein_id : NP_058602.1

name	4933428M03Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:21312804 CCDS:CCDS20337.1 GeneID:74589 MGI:1918481
definition	GO_function : GO:0008168 - methyltransferase activity [Evidence IEA]; GO:0005515 - protein binding [Evidence IEA]; GO:0016740 - transferase activity [Evidence IEA] codon_start : 1 exception : mismatches in translation product : hypothetical protein LOC74589 protein_id : NP_083289.1

name	Mgll (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6754690 CCDS:CCDS20338.1 GeneID:23945 MGI:1346042
definition	GO_function : GO:0047372 - acylglycerol lipase activity [Evidence IEA]; GO:0016787 - hydrolase activity [Evidence IEA]; GO:0004759 - serine esterase activity [Evidence IEA] citation : [PUBMED 9341166] codon_start : 1 note : monoacylglycerol lipase product : monoglyceride lipase protein_id : NP_035974.1

name	Abtb1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:13384866 CCDS:CCDS20339.1 GeneID:80283 MGI:1933148
definition	GO_function : GO:0003746 - translation elongation factor activity [Evidence IEA] GO_process : GO:0006412 - protein biosynthesis [Evidence IEA] codon_start : 1 exception : mismatches in translation note : mFLJ00331 protein product : ankyrin repeat and BTB (POZ) domain containing 1 protein_id : NP_084527.1

name	Podxl2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:31542457 CCDS:CCDS20340.1 GeneID:319655 MGI:2442488
definition	codon_start : 1 exception : mismatches in translation product : podocalyxin-like 2 protein_id : NP_795947.2

name	Mcm2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6678826 GeneID:17216 MGI:105380
definition	GO_component : GO:0005664 - nuclear origin of replication recognition complex [Evidence IDA]; GO:0005634 - nucleus [Evidence IDA] GO_function : GO:0005524 - ATP binding [Evidence IEA]; GO:0003677 - DNA binding [Evidence IEA]; GO:0003688 - DNA replication origin binding [Evidence IDA]; GO:0008094 - DNA-dependent ATPase activity [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0003676 - nucleic acid binding [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]; GO:0005515 - protein binding [Evidence IPI]; GO:0008270 - zinc ion binding [Evidence IEA] GO_process : GO:0007049 - cell cycle [Evidence IEA]; GO:0006260 - DNA replication [Evidence IEA]; GO:0006270 - DNA replication initiation [Evidence TAS]; GO:0006268 - DNA unwinding during replication [Evidence IDA]; GO:0006334 - nucleosome assembly [Evidence IDA]; GO:0006355 - regulation of transcription, DNA-dependent [Evidence IEA]; GO:0006350 - transcription [Evidence IEA] codon_start : 1 exception : mismatches in translation note : mini chromosome maintenance deficient 2 product : minichromosome maintenance deficient 2 mitotin protein_id : NP_032590.1

name	Gpr175 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:114326471 GeneID:24100 MGI:1345190
definition	GO_component : GO:0016020 - membrane [Evidence IEA] codon_start : 1 note : transmembrane domain protein regulated in adipocytes 40 kDa product : G protein-coupled receptor 175 protein_id : NP_036036.2

name	4933427D06Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:30424689 CCDS:CCDS20341.1 GeneID:232217 MGI:3026922
definition	codon_start : 1 product : hypothetical protein LOC232217 protein_id : NP_778182.1

name	Gm1965 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:85702029 GeneID:434065 MGI:3584270
definition	codon_start : 1 product : hypothetical protein LOC434065 protein_id : NP_001028663.1

name	LOC100043159 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149255240 GeneID:100043159
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001479698.1

name	EG624483 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:149255242 GeneID:624483 MGI:3645279
definition	codon_start : 1 product : hypothetical protein protein_id : XP_894127.3

name	EG624491 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:149255244 GeneID:624491 MGI:3645511
definition	codon_start : 1 product : hypothetical protein protein_id : XP_894137.2

name	EG624537 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:149255246 GeneID:624537 MGI:3645589
definition	codon_start : 1 product : hypothetical protein protein_id : XP_894176.2

name	Gm839 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:41235727 GeneID:330379 MGI:2685685
definition	codon_start : 1 exception : mismatches in translation product : hypothetical protein LOC330379 protein_id : NP_958744.1

name	4930512J16Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:149255355 GeneID:75131 MGI:1922381
definition	codon_start : 1 product : hypothetical protein LOC75131 protein_id : XP_001480416.1

name	Plxna1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6679389 CCDS:CCDS20344.1 GeneID:18844 MGI:107685
definition	GO_component : GO:0005886 - plasma membrane [Evidence IC] GO_function : GO:0017154 - semaphorin receptor activity [Evidence IPI] codon_start : 1 note : plexin 1 product : plexin A1 protein_id : NP_032907.1

name	Chchd6 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:27754146 GeneID:66098 MGI:1913348
definition	GO_component : GO:0005575 - cellular_component [Evidence ND] GO_function : GO:0003674 - molecular_function [Evidence ND] GO_process : GO:0008150 - biological_process [Evidence ND] codon_start : 1 exception : mismatches in translation product : coiled-coil-helix-coiled-coil-helix domain containing 6 protein_id : NP_079627.2

name	Txnrd3 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:110735449 GeneID:232223 MGI:2386711
definition	GO_component : GO:0005792 - microsome [Evidence IDA] GO_function : GO:0050660 - FAD binding [Evidence IEA]; GO:0015035 - protein disulfide oxidoreductase activity [Evidence IEA]; GO:0004791 - thioredoxin-disulfide reductase activity [Evidence IDA] GO_process : GO:0045454 - cell redox homeostasis [Evidence IEA]; GO:0006749 - glutathione metabolism [Evidence IDA]; GO:0006125 - thioredoxin pathway [Evidence IDA] codon_start : 1 note : thioredoxin and glutathione reductase product : thioredoxin reductase 3 protein_id : NP_694802.2 transl_except : (pos:89624783..89624785,aa:Sec)

name	V1rb7 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:16716539 CCDS:CCDS20346.1 GeneID:113855 MGI:2148518
definition	GO_component : GO:0016020 - membrane [Evidence IEA] GO_function : GO:0004930 - G-protein coupled receptor activity [Evidence IEA]; GO:0004872 - receptor activity [Evidence IEA] [Evidence ISS]; GO:0004871 - signal transducer activity [Evidence IEA] GO_process : GO:0019236 - response to pheromone [Evidence IEA]; GO:0007606 - sensory perception of chemical stimulus [Evidence TAS]; GO:0007165 - signal transduction [Evidence IEA] codon_start : 1 product : vomeronasal 1 receptor, B7 protein_id : NP_444458.1

name	V1rb9 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:16716543 GeneID:113857 MGI:2148520
definition	GO_component : GO:0016020 - membrane [Evidence IEA] GO_function : GO:0004930 - G-protein coupled receptor activity [Evidence IEA]; GO:0004872 - receptor activity [Evidence IEA] [Evidence ISS]; GO:0004871 - signal transducer activity [Evidence IEA] GO_process : GO:0019236 - response to pheromone [Evidence IEA]; GO:0007606 - sensory perception of chemical stimulus [Evidence TAS]; GO:0007165 - signal transduction [Evidence IEA] codon_start : 1 note : vomeronasal receptor 1 A12 product : vomeronasal 1 receptor, B9 protein_id : NP_444460.1

name	LOC100043146 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100043146
definition	number : 1 pseudo : _no_value

name	LOC100043146 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100043146
definition	number : 2 pseudo : _no_value

name	LOC100043153 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100043153
definition	number : 2 pseudo : _no_value

name	LOC100043153 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100043153
definition	number : 1 pseudo : _no_value

name	LOC665547 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:665547
definition	number : 1 pseudo : _no_value

name	(CDS detail)
type	STS
link
xref	UniSTS:490558
definition

name	(CDS detail)
type	STS
link
xref	UniSTS:270581
definition	standard_name : PMC129049P1

name	(CDS detail)
type	STS
link
xref	UniSTS:256435
definition	standard_name : Gp9

name	(CDS detail)
type	STS
link
xref	UniSTS:219169
definition	standard_name : RH137081

name	(CDS detail)
type	STS
link
xref	UniSTS:163395
definition	standard_name : AB007464

name	(CDS detail)
type	STS
link
xref	UniSTS:235491
definition

name	(CDS detail)
type	STS
link
xref	UniSTS:235490
definition

name	(CDS detail)
type	STS
link
xref	UniSTS:179411
definition	standard_name : AW490415

name	(CDS detail)
type	STS
link
xref	UniSTS:159536
definition	standard_name : AI181014

name	(CDS detail)
type	STS
link
xref	UniSTS:210545
definition	standard_name : RH136565

name	(CDS detail)
type	STS
link
xref	UniSTS:141362
definition	standard_name : Cnbp

name	(CDS detail)
type	STS
link
xref	UniSTS:25935
definition	standard_name : SHGC-77307

name	(CDS detail)
type	STS
link
xref	UniSTS:216088
definition	standard_name : RH132805

name	(CDS detail)
type	STS
link
xref	UniSTS:161571
definition	standard_name : RH124749

name	(CDS detail)
type	STS
link
xref	UniSTS:479151
definition	standard_name : Cnbp

name	(CDS detail)
type	STS
link
xref	UniSTS:224585
definition

name	(CDS detail)
type	STS
link
xref	UniSTS:271437
definition	standard_name : PMC15869P1

name	(CDS detail)
type	STS
link
xref	UniSTS:210532
definition	standard_name : RH136550

name	(CDS detail)
type	STS
link
xref	UniSTS:142652
definition	standard_name : RH125682

name	(CDS detail)
type	STS
link
xref	UniSTS:167498
definition	standard_name : D6Ertd71e

name	(CDS detail)
type	STS
link
xref	UniSTS:207991
definition	standard_name : AW546958

name	(CDS detail)
type	STS
link
xref	UniSTS:124773
definition	standard_name : D18356

name	(CDS detail)
type	STS
link
xref	UniSTS:207992
definition	standard_name : RH127177

name	(CDS detail)
type	STS
link
xref	UniSTS:254130
definition	standard_name : SRCR23H

name	(CDS detail)
type	STS
link
xref	UniSTS:144311
definition	standard_name : Rab7-ps1

name	(CDS detail)
type	STS
link
xref	UniSTS:270460
definition	standard_name : PMC124275P2

name	(CDS detail)
type	STS
link
xref	UniSTS:225345
definition

name	(CDS detail)
type	STS
link
xref	UniSTS:167477
definition	standard_name : RH126941

name	(CDS detail)
type	STS
link
xref	UniSTS:144310
definition	standard_name : Rab7

name	(CDS detail)
type	STS
link
xref	UniSTS:210244
definition	standard_name : RH136250

name	(CDS detail)
type	STS
link
xref	UniSTS:142648
definition	standard_name : D6Wsu137e

name	(CDS detail)
type	STS
link
xref	UniSTS:130946
definition	standard_name : D6Mit40

name	(CDS detail)
type	STS
link
xref	UniSTS:273134
definition	standard_name : PMC327172P1

name	(CDS detail)
type	STS
link
xref	UniSTS:468005
definition	standard_name : Gata2

name	(CDS detail)
type	STS
link
xref	UniSTS:270438
definition	standard_name : PMC123124P2

name	(CDS detail)
type	STS
link
xref	UniSTS:273367
definition	standard_name : PMC58532P1

name	(CDS detail)
type	STS
link
xref	UniSTS:464674
definition	standard_name : Gata2

name	(CDS detail)
type	STS
link
xref	UniSTS:159531
definition	standard_name : AB000096

name	(CDS detail)
type	STS
link
xref	UniSTS:159537
definition	standard_name : AI326313

name	(CDS detail)
type	STS
link
xref	UniSTS:123383
definition	standard_name : 18.MMHAP4FLF3.seq

name	(CDS detail)
type	STS
link
xref	UniSTS:123735
definition	standard_name : 26.MMHAP36FLA5.seq

name	(CDS detail)
type	STS
link
xref	UniSTS:130772
definition	standard_name : D6Mit226

name	(CDS detail)
type	STS
link
xref	UniSTS:162635
definition	standard_name : RH125916

name	(CDS detail)
type	STS
link
xref	UniSTS:161530
definition	standard_name : RH124708

name	(CDS detail)
type	STS
link
xref	UniSTS:130810
definition	standard_name : D6Mit261.1

name	(CDS detail)
type	STS
link
xref	UniSTS:116324
definition	standard_name : D6Mit261

name	(CDS detail)
type	STS
link
xref	UniSTS:130732
definition	standard_name : D6Mit190

name	(CDS detail)
type	STS
link
xref	UniSTS:233942
definition	standard_name : Mgll

name	(CDS detail)
type	STS
link
xref	UniSTS:211734
definition	standard_name : RH128426

name	(CDS detail)
type	STS
link
xref	UniSTS:161784
definition	standard_name : RH124962

name	(CDS detail)
type	STS
link
xref	UniSTS:164332
definition	standard_name : AI847549

name	(CDS detail)
type	STS
link
xref	UniSTS:130918
definition	standard_name : D6Mit364

name	(CDS detail)
type	STS
link
xref	UniSTS:159540
definition	standard_name : AA959861

name	(CDS detail)
type	STS
link
xref	UniSTS:213930
definition	standard_name : RH130646

name	(CDS detail)
type	STS
link
xref	UniSTS:130812
definition	standard_name : D6Mit263

name	(CDS detail)
type	STS
link
xref	UniSTS:130797
definition	standard_name : D6Mit248

name	(CDS detail)
type	STS
link
xref	UniSTS:235493
definition

name	(CDS detail)
type	STS
link
xref	UniSTS:179412
definition	standard_name : AU023851

name	(CDS detail)
type	STS
link
xref	UniSTS:210429
definition	standard_name : RH136443

name	(CDS detail)
type	STS
link
xref	UniSTS:207993
definition	standard_name : RH127255

name	(CDS detail)
type	STS
link
xref	UniSTS:179413
definition	standard_name : AU018164

name	(CDS detail)
type	STS
link
xref	UniSTS:235489
definition

name	(CDS detail)
type	STS
link
xref	UniSTS:179414
definition	standard_name : AU024342

name	(CDS detail)
type	STS
link
xref	UniSTS:125271
definition	standard_name : MHAa67d2.seq

name	(CDS detail)
type	STS
link
xref	UniSTS:207994
definition	standard_name : AU014819

name	(CDS detail)
type	STS
link
xref	UniSTS:272923
definition	standard_name : PMC313053P1

name	(CDS detail)
type	STS
link
xref	UniSTS:130879
definition	standard_name : D6Mit325

name	(CDS detail)
type	STS
link
xref	UniSTS:159541
definition	standard_name : AI196535

name	(CDS detail)
type	STS
link
xref	UniSTS:495550
definition

name	(CDS detail)
type	STS
link
xref	UniSTS:488212
definition

name	(CDS detail)
type	STS
link
xref	UniSTS:122950
definition	standard_name : 08.MMHAP84FRC8.seq

name	(CDS detail)
type	STS
link
xref	UniSTS:495554
definition

name	(CDS detail)
type	STS
link
xref	UniSTS:494016
definition

name	(CDS detail)
type	STS
link
xref	UniSTS:493164
definition

name	EG545864 (CDS detail)
type	misc_RNA
link	vega ensembl MGI NCBI
xref	GI:149255333 GeneID:545864 MGI:3647624
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 10 mRNAs, 1272 ESTs, 4 Proteins product : predicted gene, EG545864 transcript_id : XR_035706.1

name	LOC665416 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149255235 GeneID:665416
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 5 ESTs, 6 Proteins product : similar to Rps19 protein pseudo : _no_value transcript_id : XR_034267.1

clone name	MSMg01-376L05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-341N02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-164A15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-055E22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-428C07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-356I23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-105F23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-141B08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-451O13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-437A09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-505I08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-334D07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-438A17
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-365L14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-322C11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-130O20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-503N02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-309G14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-409K16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-417M01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-335G04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-453D02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-418L05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-454H02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-519O08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-428J24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-095P06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-060B15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-104N07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-147G22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-050B17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-269B05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-502I09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-406D20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-267E21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-340C14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-273L06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-280F22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-214B11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-085G13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-109C18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-519O14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-508B04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-533K10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-327B03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-416G13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-485A13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-466C11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-480P18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-507A12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-183H15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-143O24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-365J07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-454N22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-454A24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-209J15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-203J16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-409A17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-273N22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-280F12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-494A08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-266A06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-329D15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-440M06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-162M10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-085L07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-113O09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-088M18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-394I20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-337L06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-500L12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-438D10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-447P07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-135D14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-095K05
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-128E09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-128E10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-147P07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-385D04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-462G06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-529E09
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-390C23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-358O03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-160N01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-385D22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-265A10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-432M06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-107N23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-340J11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-421O22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-085N12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-273E02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-529L08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-152H03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-522L02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-409E24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-052P15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-259J16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-294N05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-245A01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-327M22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-016G12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-003N16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-003O17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-003P16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-003P17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-145K22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-182N11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-244D07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-266I09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-100D07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-269N24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-255C14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-166C19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-029G08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-027A08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-061P16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-041F13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-054I23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-029I22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-155K11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-159O10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-175A11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-061E19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-035E11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-298K21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-334H15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-312E08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-002C24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-179A08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-179L05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-301J06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-090L19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-196J24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-325I23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-222J21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-057B12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-056N21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-336D14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-337L11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-022E23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-020P05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-257I17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-121K23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-154N07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-241O14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-267H10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-008H12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-045N13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-208J15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-085A13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-219C12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-325M08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-190P16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-163F05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-177I03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-246I01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-052D17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-224P19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-044B23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-236L19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-247O14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-220O10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-237M08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-060D05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-171N04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-223M12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-227P14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-139K05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-094H23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-058H20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-309G15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-167J21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-226N14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-202C09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-172M21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-332E10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-035B11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-214E19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-081F17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-137J11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-224P23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-081J08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-265L23
singlet/doublet	singlet
plural/unique	unique

BAC End Information

BAC end	BAC-end 1	BAC-end 2
end name	MSMg01-485A13.T7 (MSMg01no485_a13.b1)	MSMg01-485A13.TJ (MSMg01no485_a13.g1)
ACC	AG564576	AG564577
length	1,080	731
length of high quality (start - end)	---	609 (79 - 687)
definition	CHROMAT_FILE: MSMg01no485_a13.b1 PHD_FILE: MSMg01no485_a13.b1.phd.1 CHEM: term DYE: big TIME: Wed May 18 20:06:50 2005	CHROMAT_FILE: MSMg01no485_a13.g1 PHD_FILE: MSMg01no485_a13.g1.phd.1 CHEM: term DYE: big TIME: Wed May 18 20:06:50 2005
singlet/doublet	---	singlet
BLAST hit	no hit data	unique
sequence	TTTGTGGGTCCATGAGTATTTGTGGTGCGGTACGGCGTATCGTCGATTAT CCCCATCAAACAATAAAGACACTCGCCGTCCTGTTTCTCCTCTCCGGCGG CGTCCCCTCGGCTCAATACGAGTTGTTCCCGCACCGGAGTGTATCTTTCA CTTCTTTTCCGCCGGCGATAGATTGAGCCCTACTGGATGGTAAGGCCTTT GAGGAGCTATAGGATCATTGTCTCTGGGTATGGCAGCTTTCTCGGTAGGT AAGTCGTTGTGTTAGCTACGTAGTCGCATGCACTGTCGCCTCAGACGCAG AGCGTGGCACCGCAGTGGGCTGTACAAAGTCATACATAACAAGAATAACC AGGAGTGTATCCGTAGGCCTATAACACTATTAGAATTACCTTAGTCTAGT TTGACCAATCATAGTTGCCATTGATCATGGAGATCATTCCTTTAGTGCTT AAGACGACCTCGTTTGAATGTCTCTTTATATAATGAAGATATCTCGATCT TATAACACAGTTTTTATCATACTATATAACTGAAGCTGTATAGCTTATTC TGCTACTGACATGTCTAAGCAGCTATTAAATGGTCGGCAGGTGGGCGCGC CTCAGAAGTGAGAATCTGTTCCCTATATTAAGCGTGGCACACGTATATGG GAAGTTCGTAGTAGATGGTCGTGCACTGCAGGAGGAAATCGCAGTGGTCT CTGTTGCTGCAGCGACACATATTGTCTTCGAGTTTGCAGGGTGGTAGTTA CAACGGCATTTAGGCAGGCGGACTCTTGGTGGTGGGTAGTTCGCTCTAGT GAGGAGATTGATGGATAAGGACTAGTTAAGATTCATTTAATCTGCAATTA CGCTATATGAATGAGACAACTTATTTTTAATCCTCGCTGTATTGGTTGTA GTAATGCGCGTACATTAATCCTCTTTATGAGACATTATATATGTGAGATG CGCCCTCTATTGTTAACGACAGAGTTTGTATATTATACTTACTAGCCGTG TACTCAGATTTATTATGAGGTCCGCATATGTAGATACAGCAGCGACACAG TGTGGCTCAGCCCTCTGATGACGAGGNGAG	TTTTGGCCATGATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX XXXXXXXXXXXXXXXXXXXXXXXXXXXXTTGGGCTGCCCTGGAATGGACA GTATGCCTCCTTGGATCCTGTCTTGGGCTTTTAGCTCTCTGCTGTGCTTT GAACCCCAAGTCCTGAACTCCCAAGTGCTCAGCCTGGACGGTGCCTTGTT CAGTCTGTCCTTGCACAGCCTAGACTTGAGTCTCAGGACTTCCTCAACAC GAAGCTCTTCCCCAGGTCCTCTCGGCTCTTGGATTTGTTCCTTCAATCTG CCTGTTAACCCCCATCCCTTTTTATCTTAGCTCAGAGCAGCCTCCTAACT CTAACCCTTCCCTGCCTCTCCAACTCAAACCCACAACTCCAGCTCCCCCA CTCAGCAGACAGCCAGGCTTGGCCAGCACTCTGCTATGGCTCTGCCTCAG CCCTCTCACACCAAGCCTGTCCTTCCAACCCTCACCCACATAGAAACCTC CCATCTCAGAAGGTCCTGCCACTTGCCAACCTAGATTCCTCAGCCACTGA GACCCTTCGAGGGGAGTAGAGGGGGCTGGTGGGACAAGGAGCTCATAACA AGCACAGCTCATGGTCAGTGTGTCCTTGCTGAAGGGTGTCAGAGAGAAAC TCAGGATAGAGCAGGCAGGAGGCAAGATATGGAGGAACAGAAATTCTCCT GGTGGGCTAAGCACTCCAGGGGCAGGTGGAG
quality values	Open. Hide. 8 8 8 8 8 8 8 6 6 8 6 6 6 8 8 8 8 8 8 6 8 7 6 8 8 8 8 8 8 8 8 8 8 8 8 8 6 6 6 6 6 8 8 8 8 10 8 8 8 8 8 13 10 10 8 8 8 8 6 6 8 8 8 10 9 11 11 10 6 6 6 6 8 8 8 8 8 8 6 6 6 6 8 8 9 9 10 8 8 8 10 8 8 10 8 8 8 8 8 9 10 11 13 11 12 11 8 8 8 8 8 8 8 8 8 8 8 8 8 8 8 9 11 9 11 11 10 10 10 8 8 6 6 6 8 8 8 8 8 8 8 8 9 9 15 10 12 9 9 9 6 6 6 6 8 8 12 8 8 8 9 9 9 8 8 8 8 8 8 8 8 8 12 13 8 8 8 8 8 8 8 8 8 8 8 8 6 6 8 8 8 8 6 6 8 6 10 13 12 11 12 8 8 8 8 8 8 8 7 6 6 6 8 8 10 8 8 8 8 8 6 7 6 6 8 6 6 6 6 8 8 8 8 8 8 10 10 10 10 10 8 8 8 8 8 8 8 9 8 8 8 8 8 8 8 8 8 8 8 12 10 10 8 8 8 10 10 8 8 8 8 8 8 8 8 8 8 8 8 12 8 8 8 8 8 8 8 6 6 8 6 7 8 8 6 6 8 6 6 6 6 6 6 6 6 8 8 8 7 6 6 6 6 6 6 6 8 8 11 11 10 9 8 8 6 6 8 7 7 6 8 8 8 6 6 6 6 8 6 9 9 10 9 8 8 8 8 8 8 8 8 8 8 8 8 9 9 8 10 10 8 8 8 8 8 8 9 9 9 8 8 8 8 8 8 10 10 10 10 10 8 8 6 6 8 8 6 8 8 8 8 8 8 8 8 10 10 9 9 9 8 8 8 8 8 8 9 9 8 8 8 9 10 9 8 8 8 8 8 6 7 10 10 10 10 10 10 10 10 8 8 8 8 8 8 8 8 8 8 8 8 11 8 8 8 8 8 8 10 8 8 8 10 10 8 10 8 8 8 8 8 8 9 8 10 10 9 8 8 8 8 6 6 6 6 6 8 6 8 8 8 8 8 6 7 8 8 8 8 8 8 8 8 10 12 10 10 8 8 8 8 8 8 8 8 8 8 8 8 8 8 8 8 11 11 8 8 8 8 8 8 8 8 8 8 13 8 8 8 8 6 6 6 8 6 8 8 8 8 8 8 8 8 8 10 11 8 8 8 8 8 8 8 8 8 6 6 8 8 10 11 11 11 11 11 11 8 6 7 6 8 8 9 9 10 10 10 9 9 12 8 8 8 8 8 8 8 8 8 10 10 10 9 8 8 10 10 10 6 6 6 7 8 8 8 8 6 6 8 8 8 8 8 8 8 8 6 6 10 11 11 11 11 11 8 8 8 8 8 8 8 8 8 8 8 8 9 7 6 8 6 6 8 8 10 10 12 8 10 10 8 8 8 8 8 8 8 8 8 8 8 8 8 8 8 8 8 8 8 8 6 6 8 6 6 6 6 6 8 8 8 8 8 10 10 11 10 8 8 8 8 8 8 6 7 10 10 7 6 8 8 10 8 10 10 8 6 8 6 6 8 8 9 10 8 8 8 8 6 6 8 8 6 6 6 6 8 8 6 6 8 8 9 6 7 6 6 8 8 8 8 8 8 8 8 7 9 8 8 6 6 8 6 6 6 8 8 12 8 8 6 6 6 8 8 10 11 6 6 8 6 6 6 6 6 8 8 8 8 8 8 8 15 13 9 6 8 7 8 10 8 8 8 8 8 8 8 8 6 6 8 8 9 9 8 8 8 8 8 8 8 8 6 6 6 8 8 8 8 8 8 8 8 10 9 9 8 8 8 8 9 9 7 8 7 8 8 8 8 8 8 7 6 8 8 8 8 8 8 8 9 8 8 8 8 8 10 13 10 8 8 8 8 8 8 8 8 8 8 6 6 8 8 8 8 10 12 8 8 8 8 8 7 7 9 9 8 8 8 6 7 10 6 6 6 7 8 8 8 7 7 8 8 6 7 8 8 8 8 8 8 8 8 8 11 10 8 7 7 7 7 8 8 8 8 6 6 8 8 9 8 8 8 6 6 8 8 8 8 8 11 8 7 6 7 6 8 8 8 8 9 10 10 10 12 15 18 13 10 8 7 6 8 8 11 10 9 9 9 6 6 6 6 8 6 7 8 6 6 8 8 8 10 8 8 8 6 6 8 10 8 8 8 8 8 8 8 8 8 8 6 6 8 8 8 6 6 6 6 10 6 8 8 8 12 8 8 8 8 8 6 8 6 6 8 6 6 8 6 6 6 6 8 6 10 10 11 10 8 8 8 8 8 8 8 8 8 6 6 8 8 8 8 10 10 10 9 10 8 10 8 8 8 8 10 8 8 6 6 6 6 8 6 6 8 3 0 3 8 8	Open. Hide. 7 7 7 7 6 6 6 7 8 8 10 10 9 9 13 15 10 10 10 13 13 41 37 37 41 42 42 50 50 50 50 50 42 37 27 27 11 9 6 6 6 6 6 6 8 8 8 8 8 11 12 14 11 11 11 25 25 59 59 59 47 27 27 11 9 7 7 8 8 8 9 12 10 10 10 11 14 11 24 26 28 41 41 59 59 59 59 59 57 57 57 36 42 37 37 50 50 53 53 53 57 53 53 53 68 68 68 68 68 68 68 68 68 68 68 68 68 68 57 48 48 48 46 44 42 30 30 32 44 59 59 59 59 57 57 57 57 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 57 57 57 57 57 57 57 57 57 57 57 57 57 57 57 68 68 68 68 68 59 59 57 57 57 57 57 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 59 57 57 54 54 57 57 57 68 68 68 68 68 68 68 57 57 57 57 57 68 68 68 68 68 68 68 68 68 57 57 57 57 43 43 43 57 59 59 59 59 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 59 59 57 57 57 57 68 68 68 68 68 68 68 68 68 68 57 57 57 59 59 59 59 59 59 57 57 57 57 57 57 57 57 59 59 59 59 59 59 59 59 28 21 8 8 8 8 8 8 8 9 11 15 27 28 41 47 48 59 59 59 59 59 59 59 59 59 59 59 59 59 59 59 59 59 59 59 59 68 68 68 68 68 59 59 57 57 57 59 59 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 59 59 59 59 59 59 59 57 57 48 48 48 48 59 57 57 57 57 57 68 68 68 68 68 68 68 68 68 57 57 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 59 59 57 57 57 59 59 68 68 68 68 57 57 57 57 57 57 57 68 68 59 59 59 68 68 68 68 54 54 54 54 54 54 57 68 68 68 57 57 57 57 57 57 57 59 48 48 48 57 57 57 57 57 59 59 59 59 59 59 59 59 41 37 37 34 29 31 41 43 59 59 47 47 46 48 48 48 48 47 47 47 47 47 47 59 59 48 48 48 48 48 50 57 43 43 40 40 59 59 59 47 41 41 35 35 30 31 27 37 34 39 34 34 28 37 37 44 59 41 37 37 33 33 28 34 34 59 59 59 57 48 48 48 48 47 37 37 30 37 37 32 29 31 37 37 41 47 47 40 40 43 40 43 43 48 48 48 48 48 47 47 41 41 41 37 32 29 31 39 39 41 39 47 41 41 41 41 34 31 39 41 41 41 43 30 25 18 18 18 22 28 35 34 32 21 21 12 12 12 21 17 34 31 35 28 26 13 13 13 28 28 20 31 32 37 37 30 25 22 30 22 12 9 9 9 9 17 20 25 32 23 28 28 33 29 29 35 11 11 10 9 9 8 6 9 9 9 9 22 32 32 25 24 22 21 14 15 15 25 21 32 25 31 20 20 18 28 24 24 26 29 21 22 20 23 19 24 26 24 17 17 13 27 13 13

Alignment Information

BAC End 1

BAC End 2

Query= MSMg01no485_a13.g1 MSMg01no485_a13.g1 CHROMAT_FILE:
MSMg01no485_a13.g1 PHD_FILE: MSMg01no485_a13.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:06:50 2005
         (609 letters)



>mm_chr6_88698797_88699804
          Length = 1008

 Score = 1023 bits (529), Expect = 0.0
 Identities = 569/591 (96%), Gaps = 15/591 (2%)
 Strand = Plus / Minus

                                                                        
Query: 18   ggacagtatgcctccttggatcctgtcttgggcttttagctctctgctgtgctttgaacc 77
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1008 ggacagtatgcctccttggatcctgtcttgggcttttagctctctgctgtgctttgaacc 949

                                                                        
Query: 78   ccaagtcctgaactcccaagtgctcagcctggacggtgccttgttcagtctgtccttgca 137
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 948  ccaagtcctgaactcccaagtgctcagcctggacggtgccttgttcagtctgtccttgca 889

                                                                        
Query: 138  cagcctagacttgagtctcaggacttcctcaacacgaagctcttccccaggtcctctcgg 197
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 888  cagcctagacttgagtctcaggacttcctcaacacgaagctcttccccaggtcctctcgg 829

                                                                        
Query: 198  ctcttggatttgttccttcaatctgcctgttaacccccatccctttttatcttagctcag 257
            |||||||||||||||||||||              |||||||||||| | || |||||||
Sbjct: 828  ctcttggatttgttccttcaa--------------cccatcccttttcacctgagctcag 783

                                                                        
Query: 258  agcagcctcctaactctaacccttccctgcctctccaactcaaacccacaactccagctc 317
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 782  agcagcctcctaactctaacccttccctgcctctccaactcaaacccacaactccagctc 723

                                                                        
Query: 318  ccccactcagcagacagccaggcttggccagcactctgctatggctctgcctcagccctc 377
            ||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 722  ccccactcagcagccagccaggcatggccagcactctgctatggctctgcctcagccctc 663

                                                                        
Query: 378  tcacaccaagcctgtccttccaaccctcacccacatagaaacctcccatctcagaaggtc 437
            ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 662  tcacaccaagcctgtccttccaaccctca-ccacatagaaacctcccatctcagaaggtc 604

                                                                        
Query: 438  ctgccacttgccaacctagattcctcagccactgagacccttcgaggggagtagaggggg 497
            |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 603  ctgccacttgccaacctagattcctcagccactgagacccttcgaggggagtggaggggg 544

                                                                        
Query: 498  ctggtgggacaaggagctcataacaagcacagctcatggtcagtgtgtccttgctgaagg 557
            ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 543  ctggtgggacaaggagctcataacaagcacagctcgtggtcagtgtgtccttgctgaagg 484

                                                               
Query: 558  gtgtcagagagaaactcaggatagagcaggcaggaggcaagatatggagga 608
            |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 483  gtgtcagagagaaactcaggatagagcaggcaggaggcaagatatggagga 433


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 609
Length of database: 1008
Length adjustment: 10
Effective length of query: 599
Effective length of database: 998
Effective search space:   597802
Effective search space used:   597802
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)

BAC Information

Search Parameter

Search Result

BAC

BAC End Information

Alignment Information