NNNGGATCTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XCGCGGAATTCTTTGTTCTCCTCTGAGCCCCATTTTTTAATGGGGTTATT
TGATTTTCTGAAGTCCACCTTCTTGAGTTCTTTATATATGTTGGATATTA
GTCCCCTATCTGATTTAGGATAGGTAAAGATCCTTTCCCAATCTGTTGGT
GGTCTTTTTGTCTTATTGACAGTGTCTTTTGCCTTGCAGAAACTTTGGAG
TTTCATTAGGTCCCATTTGTCAATTCTCGATCTTACAGAGCAAGCCATTG
CTGTTCTGTTCAGGAATTTTCCCCTGTACCCATATCTTCAAGGCTTTTCC
CCACTTTCTCCTCTATAAGTTTCAGTGTCTCTGGTTTTATGTGAAGTTCC
TTGATCCACTTAGATTTGACCTTAGTACAAGGAGATAAGTATGGATCGAT
TCGCATTCTTCTACATGATAACAACCAGTTGTGCCAGCACCAATTGTTGA
AAATGCTGTCTTTCTTCCACTGGATGGTTTTAGCTCCCTTGTCGAAGATC
AAGTGACCATAGGTGTGTGGGTTCATTTCTGGGTCTTCAATTCTATTCCA
TTGGTCTACTTGTCTGTCTCTATACCAGTACCATACAGTTTTTATCACAA
TTGCCCTGTAGTAAAGCTTTAGGTCAGGCATGGTGATTCCACCAGAGGTT
CTTTTATCCTTGAGAAGAGTTTTTGCTATCCTAG

NNNNNCCGATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAGGAAGGTTTTGTCTAACC
ACTGCATTTATTATTATCTTTCATGTTTACAGGTAAAGAAAAATGGCCTA
AGAATTATAAAGATTTTGATAAAGTGGCCAGTCAAGGTTATATTTATGGC
ACACATTCAATGTTTTTTAATCCCTCAGACTCAGAATCTGAGAAGTCAAA
AGTCTACCTTCCTCATGAAATAGGAAATTAAAAAGTGGACTTGTCAAAAA
AAATACAGATATTTAATGACTGGGTCAGAATTTCTCACCTATAAAGTGTT
CCAAAATGGAATAAATCCTTCAAGGGTCATTGGATTTACTAAAGGAACTA
AGTTTAAAAACTTGGTGCAGTATCTGGCTGATGGAAAAAGCTCAATAAAT
ATTCCTTGCCTCAATTATGTTGGCAATTGAGTCCAGTAGCAATGCATGCC
TTATCTAGACAGATTCAGCCAAGGGTCTTCTCTCCTTGATTTCCTTGTTT
GTTTGCTTATGTTTGTTGTTGTCGTTGTTGCTTCTCTCCCGCAAAACATT
AAATTTCTAAACTACATAGTTATTTAAGTATGTGATTCTTATAACAATTT
TAAATGATTTATCTATATTTTGATGAAAAATGAATCAATGGCTTGTTGAA
AAGCAGTAACCCTGCAGTGTGAAAAGGGTTCTAATCTACCAGC

Query= MSMg01no485_f07.g1 MSMg01no485_f07.g1 CHROMAT_FILE:
MSMg01no485_f07.g1 PHD_FILE: MSMg01no485_f07.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:07:14 2005
         (618 letters)



>mm_chr6_25211003_25212017
          Length = 1015

 Score = 1141 bits (590), Expect = 0.0
 Identities = 610/618 (98%), Gaps = 3/618 (0%)
 Strand = Plus / Minus

                                                                       
Query: 1   aggaaggttttgtctaaccactgcatttattattatctttcatgtttacaggtaaagaaa 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 815 aggaaggttttgtctaaccactgcatttattattatctttcatgtttacaggtaaagaaa 756

                                                                       
Query: 61  aatggcctaagaattataaagattttgataaagtggccagtcaaggttatatttatggca 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 755 aatggcctaagaattataaagattttgataaagtggccagtcaaggttatatttatggca 696

                                                                       
Query: 121 cacattcaatgttttttaatccctcagactcagaatctgagaagtcaaaagtctaccttc 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 695 cacattcaatgttttttaatccctcagactcagaatctgagaagtcaaaagtctaccttc 636

                                                                       
Query: 181 ctcatgaaataggaaattaaaaagtggacttgtcaaaaaaaatacagatatttaatgact 240
           |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 635 ctcatgaaatcggaaattaaaaagtggacttgtcaaaaaaaatacagatatttaatgact 576

                                                                       
Query: 241 gggtcagaatttctcacctataaagtgttccaaaatggaataaatccttcaagggtcatt 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 575 gggtcagaatttctcacctataaagtgttccaaaatggaataaatccttcaagggtcatt 516

                                                                       
Query: 301 ggatttactaaaggaactaagtttaaaaacttggtgcagtatctggctgatggaaaaagc 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 515 ggatttactaaaggaactaagtttaaaaacttggtgcagtatctggctgatggaaaaagc 456

                                                                       
Query: 361 tcaataaatattccttgcctcaattatgttggcaattgagtccagtagcaatgcatgcct 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 455 tcaataaatattccttgcctcaattatgttggcaattgagtccagtagcaatgcatgcct 396

                                                                       
Query: 421 tatctagacagattcagccaagggtcttctctccttgatttccttgtttgtttgcttatg 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 395 tatctagacagattcagccaagggtcttctctccttgatttccttgtttgtttgcttatg 336

                                                                       
Query: 481 tttgttgttgtcgttgttgcttctctcccgcaaaacattaaatttctaaactacatagtt 540
           ||||||||||||   ||||||| ||||| | |||||||||||||||||||||||||||||
Sbjct: 335 tttgttgttgtc---gttgcttttctcctggaaaacattaaatttctaaactacatagtt 279

                                                                       
Query: 541 atttaagtatgtgattcttataacaattttaaatgatttatctatattttgatgaaaaat 600
           |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 278 atttcagtatgtgattcttataacaattttaaatgatttatctatattttgatgaaaaat 219

                             
Query: 601 gaatcaatggcttgttga 618
           ||||||||||||||||||
Sbjct: 218 gaatcaatggcttgttga 201


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 3
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 618
Length of database: 1015
Length adjustment: 10
Effective length of query: 608
Effective length of database: 1005
Effective search space:   611040
Effective search space used:   611040
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)