XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAATTCAGTTTTT
CGGCTGGGACAATGGCTCAATGAGTAAAACTGCTCACTCAGAAGGTACAG
AGACCTGAGTCCAAATCCCCAGAACCTAAATAGAAGCTAGACTCATAGCA
CAGGCATCGGTTGTCCCAGTGCTCCTATGAGGAAATAGGATGGGAGATAG
GGGAGCCCCCAGAAAGTCACTTCAGCCAACCTGATGTGTACAGAAAAAAA
AAAAATCAAAGAAGCCTTGCTTCTAACAAGGTAAGGAATAACACCCAAGT
TTGTCCTTTAACCTCTGAATATACTGTATGCCATGTGTATGACTACATTC
ATACATATGAATGCTGGCACATATGAACACACGCACACACACACACTAAA
CCCACCCGGATCCTTAGACTCTGTAGCATTCATTTTCACAACCCACTCAA
TGCCTCCAGAAGGCACATTGTCCAGCCCCTCCTCAGCAACTCTTTTTTTT
TTTTAGCACTTTTTATGGCTTCTGGAATATCTGTGACCAAAAAAAAAAAA
CAAAAAACAAAAAAACAACAACAACAACAACAACAAAAATGATTCAGCGA
GGGAGAATGTGTAGAAAACCTCTTCATCTTTGTTCACCATGGCTTTTGAA
GAAGGAAATGGAGTCAGTCACAGTCAGCTCTGTATTCACTTTAGTTTCCT
TAGGAACACAGGCAGACAGGTGGC

CGATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXCTGATCTTTCCAAAACTTTTATCT
TGAATGGGTGTTGGATCTTGTCAAATGCTTTTTCTGCATCTAACAAGATG
ATCATGTGGTTTTTGTCTTTGAGTTTGTTTATATAATGGATTACATTGAT
GGATTTTCGTATATTAAACCATCCCTGCATCCCTGGAATAAAACCTACTT
GGTCAGGATGGATGATTTCTTTAATGTGTTCTTGGATTCGGTTAGCGAGA
ATTTTATTAAGGATTTTTGCATCGATATTCATAAGAGAAATTGGTCTGAA
GTTCTCTATCTTTGTTGGATCTTTCTGTGGTTTAGGTATCAGAGTAATAG
TGGCTTCATAAAATGAGTTGGGTAGAGTACCTTCTACTTCTATCTTGTGA
AATAGTTTGTGCAGAACTGGAATTAGATCTTCTTTGAAGGTCTGATAGAA
CTCTGCACTAAACCCATCTGGTCCTGGGCTTTTTTTGGCTGGGAGACTAT
TAATAACTGCTTCTATTTCTTTAGGGGATATGGGACTGTTTAGAAGGTCA
ACTTGATCCTGATTCAACTTTGGTACCTGGTATCTGTTCAGAAATTTGTC
CATTTCGTCCAGGTTTTCCAGTTTTGTTGAGTATAAGCTTTTGTAGAAGG
ATCTGATGGTGTTTTGGATTTCTTCAGGATCTGTTGTTATGTCTCCCTTT
TCATTTCTG

Query= MSMg01no488_h15.b1 MSMg01no488_h15.b1 CHROMAT_FILE:
MSMg01no488_h15.b1 PHD_FILE: MSMg01no488_h15.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:11:25 2005
         (670 letters)



>mm_chr6_8782208_8783277
          Length = 1070

 Score = 1195 bits (618), Expect = 0.0
 Identities = 662/686 (96%), Gaps = 21/686 (3%)
 Strand = Plus / Plus

                                                                       
Query: 5   gaattcagttt-ttcggctgggacaatggctcaatgagtaaaactgctcactcagaaggt 63
           ||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 186 gaattcagtttctt-ggctgggacaatggctcaatgagtaaaactgctcactcagaaggt 244

                                                                       
Query: 64  acagagacctgagtccaaatccccagaacctaaatagaagctagactcatagcacaggca 123
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 245 acagagacctgagtccaaatccccagaacctaaatagaagctagactcatagcacaggca 304

                                                                       
Query: 124 tcggttgtcccagtgctcctatgaggaaataggatgggagataggggagcccccagaaag 183
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 305 tcggttgtcccagtgctcctatgaggaaataggatgggagataggggagcccccagaaag 364

                                                                       
Query: 184 tcacttcagccaacctgatgtgtacagaaaaaaaaaaaa-tcaaagaagccttgcttcta 242
           ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 365 tcacttcagccaacctgatgtgtacagaaaaaaaaaaaaatcaaagaagccttgcttcta 424

                                                                       
Query: 243 acaaggtaaggaataacacccaagtttgtcctttaacctctgaatatactgtatgccatg 302
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 425 acaaggtaaggaataacacccaagtttgtcctttaacctctgaatatactgtatgccatg 484

                                                                       
Query: 303 tgtatgactacattcatacatatgaatgctggcacatatgaacacacgcacacacacaca 362
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 485 tgtatgactacattcatacatatgaatgctggcacatatgaacacacgcacacacacaca 544

                                                                       
Query: 363 ctaaacccacccggatccttagactctgtagcattcattttcacaacccactcaatgcct 422
           || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 545 ctgaacccacccggatccttagactctgtagcattcattttcacaacccactcaatgcct 604

                                                                       
Query: 423 ccagaaggcacattgtccagcccctcctcagcaactctttttttttttt--------agc 474
           |||||||||||||||||||||||||||||||||||||||||||||||||        |||
Sbjct: 605 ccagaaggcacattgtccagcccctcctcagcaactcttttttttttttttttttttagc 664

                                                                       
Query: 475 actttttatggcttctggaatatctgtgaccaaaaa-------aaaaaaacaaaaa--ac 525
           ||||||||||||||||||||||||||||||||||||       ||||||| |||||  ||
Sbjct: 665 actttttatggcttctggaatatctgtgaccaaaaacaacaacaaaaaaaaaaaaacaac 724

                                                                       
Query: 526 aaaaa-aacaacaacaacaacaacaacaaaaatgattcagcgagggagaatgtgtagaaa 584
           ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 725 aaaaacaacaacaacaacaacaacaacaaaaatgattcagcgagggagaatgtgtagaaa 784

                                                                       
Query: 585 acctcttcatctttgttcaccatggcttttgaagaaggaaatggagtcagtcacagtcag 644
           |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 785 acctcttcatctttgttcaccatggcttttgaagaaggaagtggagtcagtcacagtcag 844

                                     
Query: 645 ctctgtattcactttagtttccttag 670
           ||||||||||||||||||||||||||
Sbjct: 845 ctctgtattcactttagtttccttag 870


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 51
Number of extensions: 4
Number of successful extensions: 4
Number of sequences better than 10.0: 1
Number of HSP's gapped: 2
Number of HSP's successfully gapped: 1
Length of query: 670
Length of database: 1070
Length adjustment: 10
Effective length of query: 660
Effective length of database: 1060
Effective search space:   699600
Effective search space used:   699600
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)