Query= MSMg01no489_b13.b1 MSMg01no489_b13.b1 CHROMAT_FILE:
MSMg01no489_b13.b1 PHD_FILE: MSMg01no489_b13.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:12:12 2005
(613 letters)
>mm_chr6_96814167_96815182
Length = 1016
Score = 1120 bits (579), Expect = 0.0
Identities = 602/611 (98%), Gaps = 3/611 (0%)
Strand = Plus / Plus
Query: 4 gaattccaccaagtacctgaaagagtctgaagccaatttggccctccaggcttcctaaag 63
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 204 gaattccaccaagaacctgaaagagtctgaagccaatttggccctccaggcttcctaaag 263
Query: 64 gactgcagccctattgatagcttgacagtatcttctcagtcacgagacccttgggagata 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 gactgcagccctattgatagcttgacagtatcttctcagtcacgagacccttgggagata 323
Query: 124 atcagccaaatccagacttctcatcttctaggatgagatgttgatttgatggcaatgtgt 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 atcagccaaatccagacttctcatcttctaggatgagatgttgatttgatggcaatgtgt 383
Query: 184 tagagcagcaatagaaaactaactgtttactcagatttaccagtttacatttgactacat 243
|||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 384 tagagcagcaataggaaactaactgtttactcagatttaccagtttacattttactacat 443
Query: 244 ttgacacatccttcatgacctgtctcactgatactcatttacgcctcaagacatcagtgc 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 ttgacacatccttcatgacctgtctcactgatactcatttacgcctcaagacatcagtgc 503
Query: 304 atatttgcttaaaatagacatccttgtataattagtcagataaccttctgattaatgctg 363
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 504 atatttacttaaaatagacatccttgtataattagtcagataaccttctgattaatgctg 563
Query: 364 tcatgcaatatctacacatgcaggtaatcccagcaatgccctatgtctcccctgcccaga 423
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 564 tcatgcaatatctacacatgcaggtagtcccagcaatgccctatgtctcccctgcccaga 623
Query: 424 ttctcctaaggaagtgtgcctcacattcgcttgttacaggctagttagctcccttgtatt 483
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 624 ttctcctaaggaagtgtgcctcacattcgcttgttacaggctagttagctcccttgtatt 683
Query: 484 agaacctgttcctcaatcttttttgaccttaacatcgttaaaagaacacatggaagtcac 543
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 684 agaacctgttcctcaatcttttttgaccttaacatcattaaaagaacacatggaagtcac 743
Query: 544 tttataaagttctctcctgttgttgttgttgtt---tgtggtgttgttttggttttgatg 600
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 744 tttataaagttctctcctgttgttgttgttgttgtttgtggtgttgttttggttttgatg 803
Query: 601 tgtgtgtgtgt 611
|||||||||||
Sbjct: 804 tgtgtgtgtgt 814
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 613
Length of database: 1016
Length adjustment: 10
Effective length of query: 603
Effective length of database: 1006
Effective search space: 606618
Effective search space used: 606618
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no489_b13.g1 MSMg01no489_b13.g1 CHROMAT_FILE:
MSMg01no489_b13.g1 PHD_FILE: MSMg01no489_b13.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:12:12 2005
(242 letters)
>mm_chr6_96989319_96989964
Length = 646
Score = 422 bits (218), Expect = e-122
Identities = 238/246 (96%), Gaps = 4/246 (1%)
Strand = Plus / Minus
Query: 1 agaagagaaaggtagccttcgactctctttagagaaattagaaatgaattaatttttcag 60
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 446 agaagagaaaggtagccttcgactctctttggagaaattagaaatgaattaatttttcag 387
Query: 61 accaactcttaccatcctccgttttcacataggaagtaacggttgtgtttcttaaacagt 120
||||||| |||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 386 accaacttttaccatcctccattttcacataggaagtaacggttgtgtttcttaaacagt 327
Query: 121 taagtaccggagcaccgcatcagaactttgagtgatgtttggaaac--c--tatggtggt 176
|||||||||||||||||||||||||||||||||||||||||||||| | |||||||||
Sbjct: 326 taagtaccggagcaccgcatcagaactttgagtgatgtttggaaacatcattatggtggt 267
Query: 177 gccatggactatggctgtatatggaatttgtttggatgaaatcagtgtgttgaattaagt 236
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 266 gccatggactatggctgtatatgggatttgtttggatgaaatcagtgtgttgaattaagt 207
Query: 237 gctgaa 242
||||||
Sbjct: 206 gctgaa 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 9
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 242
Length of database: 646
Length adjustment: 9
Effective length of query: 233
Effective length of database: 637
Effective search space: 148421
Effective search space used: 148421
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
