NNNNCCTCAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
CGCGGAATTCAACAGTTTTTTGCTGAGATTTTTGTTCACAATAGGTATTG
GTTTGAAAGTATTCTGACAATTACTTTTTTTGGTGTGTAACCTGTAAACT
GTCTAGTTTTGGGACAATAGTTACACTAGTCTCATTTAAAAACTTTGGAC
TTACTTTATTTAACTCTAGGAAGGATGATTTTGTAATGATCATAGTTTTC
TAAATAGTTAATAAAATACTCAAGTGAAGTCATAAAAACTCAGGACATTT
TTTGTTAACTCTTAAATAATTATTCAGATTATCTTTCTTGACTTTTTAAA
AAGATGGAATCTCACTATGTATCAGTGGCTGACATAAAAAATAGTATATG
GGCCAGGCTGTATGTAAAGTGACAGAGATGTGCTTTTCTCTGCTTTCAGA
ATGCTGGGATTAAATTCATGCATGACCATATTCTGCTTCATTGTGTTTTC
AAAGCCCAGCCTATTTCTGATGAGCTGCTGAGTGGAGGAGCATAATGGGA
ACTCTCTCAAGCTTTATATTGGGATATGCACTTAGCCCTGTTGATTGATT
CATCACACAGGTTCACGGTATATACTTACTTTCAATCTGTTTAGAGACTA
ATCATTACTTTTTTTTTCTTTATGTATGTGCAAGTTTGTGTGTGATTGTG
TGTGTGTGTGTGTACCTGTGAGTATATGGCCAGAAGAATACAAAGTTTTA
TTN

NAATTCTGGNNCCCCGGTTCAAATTGGGGGNNNNNNTTTCCTCAAAATCT
TTTTTTTTTTNAATTTTTTGGGGGGAGTGGGGGGGGTGGGGGGGGGGGGG
GTTGGGCTGGGGATGGGGGGGGGGGGGGGGGGGGGGCTANNNNNNNNNNN
NNNNNNNAAAACCTTTGTTCTCCGTGGTGATATTCTTTNNNTTTTNNNTT
TAAAANNNNNNTTTTTTTTAGGGATTGGGGGTGGGGGGGGGGGGGGGGGC
GGGGGGGGGGGGGGGGGGTGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
TNTNTNNTNNNNTTTNNNNNNTNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNTTTTTTTTTTTTNNNNNNNNNNNNNNNTNNNNTNNNNNNTNNNTTNNT
TNTNNNNNNNTTTTTTTTTTTTTTTTTTTNNTTTTTTTTTCTTCTTGTTT
G

Query= MSMg01no489_m09.b1 MSMg01no489_m09.b1 CHROMAT_FILE:
MSMg01no489_m09.b1 PHD_FILE: MSMg01no489_m09.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:13:08 2005
         (633 letters)



>mm_chr6_79605136_79606168
          Length = 1033

 Score = 1205 bits (623), Expect = 0.0
 Identities = 629/631 (99%), Gaps = 1/631 (0%)
 Strand = Plus / Plus

                                                                       
Query: 4   ggaattcaacagttttttgctgagatttttgttcacaataggtattggtttgaaagtatt 63
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 204 ggaattcaacagttttttgctgagatttttgttcacaataggtattggtttgaaagtatt 263

                                                                       
Query: 64  ctgacaattactttttttggtgtgtaacctgtaaactgtctagttttgggacaatagtta 123
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 264 ctgacaattactttttttggtgtgtaacctgtaaactgtctagttttgggacaatggtta 323

                                                                       
Query: 124 cactagtctcatttaaaaactttggacttactttatttaactctaggaaggatgattttg 183
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 cactagtctcatttaaaaactttggacttactttatttaactctaggaaggatgattttg 383

                                                                       
Query: 184 taatgatcatagttttctaaatagttaataaaatactcaagtgaagtcataaaaactcag 243
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 taatgatcatagttttctaaatagttaataaaatactcaagtgaagtcataaaaactcag 443

                                                                       
Query: 244 gacattttttgttaactcttaaataattattcagattatctttcttgactttttaaaaag 303
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 gacattttttgttaactcttaaataattattcagattatctttcttgactttttaaaaag 503

                                                                       
Query: 304 atggaatctcactatgtatcagtggctgacataaaaaatagtatatgggccaggctgtat 363
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 504 atggaatctcactatgtatcagtggctgacataaaaaatagtatatgggccaggctgtat 563

                                                                       
Query: 364 gtaaagtgacagagatgtgcttttctctgctttcagaatgctgggattaaattcatgcat 423
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 564 gtaaagtgacagagatgtgcttttctctgctttcagaatgctgggattaaattcatgcat 623

                                                                       
Query: 424 gaccatattctgcttcattgtgttttcaaagcccagcctatttctgatgagctgctgagt 483
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 624 gaccatattctgcttcattgtgttttcaaagcccagcctatttctgatgagctgctgagt 683

                                                                       
Query: 484 ggaggagcataatgggaactctctcaagctttatattgggatatgcacttagccctgttg 543
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 684 ggaggagcataatgggaactctctcaagctttatattgggatatgcacttagccctgttg 743

                                                                       
Query: 544 attgattcatcacacaggttcacggtatatacttactttcaatctgtttagagactaatc 603
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 744 attgattcatcacacaggttcacggtatatacttactttcaatctgtttagagactaatc 803

                                          
Query: 604 attacttttttttt-ctttatgtatgtgcaa 633
           |||||||||||||| ||||||||||||||||
Sbjct: 804 attacttttttttttctttatgtatgtgcaa 834


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 35
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 633
Length of database: 1033
Length adjustment: 10
Effective length of query: 623
Effective length of database: 1023
Effective search space:   637329
Effective search space used:   637329
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)