Query= MSMg01no490_f18.b1 MSMg01no490_f18.b1 CHROMAT_FILE:
MSMg01no490_f18.b1 PHD_FILE: MSMg01no490_f18.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:13:55 2005
(689 letters)
>mm_chr6_17902984_17904072
Length = 1089
Score = 1272 bits (658), Expect = 0.0
Identities = 658/658 (100%)
Strand = Plus / Minus
Query: 32 agctatttcttttttggaaggcatcagggtggatgttgtcacagaatgaagatgaaaact 91
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1089 agctatttcttttttggaaggcatcagggtggatgttgtcacagaatgaagatgaaaact 1030
Query: 92 acacgtttctgtgggtataaggttaagtatttcaaatatggttagcaatcatactggttt 151
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1029 acacgtttctgtgggtataaggttaagtatttcaaatatggttagcaatcatactggttt 970
Query: 152 aggaaaatggtaatattaagtgcatctctaaggtgtatgactgctccgactaacagtggt 211
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 969 aggaaaatggtaatattaagtgcatctctaaggtgtatgactgctccgactaacagtggt 910
Query: 212 tagctaaggttacagtatcacattttatatcaccttatttatttgtttatggggtaagta 271
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 909 tagctaaggttacagtatcacattttatatcaccttatttatttgtttatggggtaagta 850
Query: 272 aagttgctaaccttccaaaactcagatatgtttcttaagtgcctagttaaccctttctga 331
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 849 aagttgctaaccttccaaaactcagatatgtttcttaagtgcctagttaaccctttctga 790
Query: 332 gccaaaagagatctagagagaattttgaagacaaatattaatgagttcagaatgtacatg 391
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 789 gccaaaagagatctagagagaattttgaagacaaatattaatgagttcagaatgtacatg 730
Query: 392 tataaactgtgacccaaaaggaacacactggccacattgtgaagctctggatcttgggtg 451
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 729 tataaactgtgacccaaaaggaacacactggccacattgtgaagctctggatcttgggtg 670
Query: 452 tgagttgtctgtagatataagcactgctgaatatggtactgaaatcaaagcctgggatag 511
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 669 tgagttgtctgtagatataagcactgctgaatatggtactgaaatcaaagcctgggatag 610
Query: 512 ctgctgtggcccaggtttgctgttcttatttgccacattggagaaggtgggcagattctc 571
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 609 ctgctgtggcccaggtttgctgttcttatttgccacattggagaaggtgggcagattctc 550
Query: 572 ctgggtagacctttgccttgtccttggctgtgttgtccagtgattattaaacagtcttgt 631
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 549 ctgggtagacctttgccttgtccttggctgtgttgtccagtgattattaaacagtcttgt 490
Query: 632 ttgacatttttgtgaagatacctatttgctaatagcttggctaatttttgactctaat 689
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 489 ttgacatttttgtgaagatacctatttgctaatagcttggctaatttttgactctaat 432
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 33
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 689
Length of database: 1089
Length adjustment: 10
Effective length of query: 679
Effective length of database: 1079
Effective search space: 732641
Effective search space used: 732641
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no490_f18.g1 MSMg01no490_f18.g1 CHROMAT_FILE:
MSMg01no490_f18.g1 PHD_FILE: MSMg01no490_f18.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:13:56 2005
(667 letters)
>mm_chr6_17780453_17781519
Length = 1067
Score = 1193 bits (617), Expect = 0.0
Identities = 655/677 (96%), Gaps = 16/677 (2%)
Strand = Plus / Plus
Query: 1 aactccacttcactgcagtcactgcactgatcccccaccccgcaactcaactgactcacg 60
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 197 aactccacttcactgcagtcactgcactgatcccccaccccgcaactcaactgactc--- 253
Query: 61 ctcttcactgctcttaaataacctctcattcctgtgctggccctctgagagctgggtata 120
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 254 ---ttcactgctcttaaataacctctcattcctgtgctggccctctgagagctgggtata 310
Query: 121 tcctatctctcattctgtgaagtctttttctgatttgtcactttgccctcacttagatgt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 311 tcctatctctcattctgtgaagtctttttctgatttgtcactttgccctcacttagatgt 370
Query: 181 tattgtttgggattaaaggtgtgtagggaaggattccagctggaa----------tgtgt 230
||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 371 tattgtttgggattaaaggtgtgtagggaaggattccagctggaaggactaaatatgtgt 430
Query: 231 actaagggcatgttccagtctgatcacacagacctaaaatgtttttggatgttatcagag 290
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 431 actaagggcatgttccagtctgatcacacagtcctaaaatgtttttggatgttatcagag 490
Query: 291 cagtgatcttgctgggttaaaattcctctacattcttctacacagatgggacaatagtat 350
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 491 cagtgatcttgctgggttaaaattcctctacattcctctacacagatgggacaatagtat 550
Query: 351 tgatgttctgtgataaatctgagaagacacacttccctgcccccaaacagctaagctgtc 410
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 551 tgatgttctgtgataaatctgagaagacacacttccctgcccccaaacagctaagctgtc 610
Query: 411 tttatttatctgttttttatgtattaaaaagggtaggacgatctagagacaaggtctgtc 470
|||| ||||||||||||| |||||||||||||||||||||||||||||||||||| ||||
Sbjct: 611 tttacttatctgttttttctgtattaaaaagggtaggacgatctagagacaaggtgtgtc 670
Query: 471 ttgtcctaatccaaatgttcagttaatttgaggcacttgcttcttaggcttaattatctg 530
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 671 ttgtcctaatccaaatgttcagttaatttgaggcacttgcttcttaggcttaattatctg 730
Query: 531 gtcacatttgatagactagttctgaattggtttttatagttaagatagcagagactgtca 590
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 731 gtcacatttgatagactagttctgaattggtttttatagttaagatagcagagactgtca 790
Query: 591 gaggacacttatagggatatgaacgactgcctgtgtgtctggtatagtttaactgaagta 650
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 791 gaggacacttagagggatatgaacgactgcctgtgtgtctggtatagtttaactgaagta 850
Query: 651 tggttatgttatttgtt 667
|||||||||||||||||
Sbjct: 851 tggttatgttatttgtt 867
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 32
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 2
Number of HSP's successfully gapped: 1
Length of query: 667
Length of database: 1067
Length adjustment: 10
Effective length of query: 657
Effective length of database: 1057
Effective search space: 694449
Effective search space used: 694449
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
