Query= MSMg01no490_h17.b1 MSMg01no490_h17.b1 CHROMAT_FILE:
MSMg01no490_h17.b1 PHD_FILE: MSMg01no490_h17.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:14:05 2005
(639 letters)
>mm_chr6_51421817_51422855
Length = 1039
Score = 1212 bits (627), Expect = 0.0
Identities = 636/639 (99%)
Strand = Plus / Plus
Query: 1 cacagaaaaaccctctctgggcgtgtgggtgggggagctagaacctgtggtggacatggt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 cacagaaaaaccctctctgggcgtgtgggtgggggagctagaacctgtggtggacatggt 260
Query: 61 tgtgccttcctttaatcccatcataagtgggtgaattgctgttagaagccagcctaccta 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tgtgccttcctttaatcccatcataagtgggtgaattgctgttagaagccagcctaccta 320
Query: 121 agtccttgtatttaccagcattctaaagaaaaaggaattaacactaagtaaggcttttct 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 agtccttgtatttaccagcattctaaagaaaaaggaattaacactaagtaaggcttttct 380
Query: 181 taaggaggatcacaatacatttttttgaaaaagcgttgtacagtttttgctggatgcttt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 taaggaggatcacaatacatttttttgaaaaagcgttgtacagtttttgctggatgcttt 440
Query: 241 tgaggttaaaaatgcatgtttgtgggttataaaacagctcaatcttcagagcccaaggaa 300
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 tgaggtaaaaaatgcatgtttgtgggttataaaacagctcaatcttcagagcccaaggaa 500
Query: 301 aagtggaaagaaaaaacaagtttctaccagagtgtgccttgatttccacacaggagctcc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 aagtggaaagaaaaaacaagtttctaccagagtgtgccttgatttccacacaggagctcc 560
Query: 361 atcatattgttaatgagctgaatgggggaagagtcatggacagctctataaaagtcttgt 420
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 561 atcatattgttaatgagctgaatgggggaagagtcgtggacagctctataaaagtcttgt 620
Query: 421 gggttggcatgattgccctggaagctgtgctgttctggagacactgagcattcattagtg 480
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 gggttggcatgattaccctggaagctgtgctgttctggagacactgagcattcattagtg 680
Query: 481 cacagagagtgagttagatagagctcacgttgccatgagcaagaattacaaactgtctag 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 cacagagagtgagttagatagagctcacgttgccatgagcaagaattacaaactgtctag 740
Query: 541 gagtgatctaagactgttagatcaattctgtttcttttcagcgatttctgactgttgcta 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 gagtgatctaagactgttagatcaattctgtttcttttcagcgatttctgactgttgcta 800
Query: 601 aatccagtgttagttttcttgggatttctagtaagttag 639
|||||||||||||||||||||||||||||||||||||||
Sbjct: 801 aatccagtgttagttttcttgggatttctagtaagttag 839
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 639
Length of database: 1039
Length adjustment: 10
Effective length of query: 629
Effective length of database: 1029
Effective search space: 647241
Effective search space used: 647241
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no490_h17.g1 MSMg01no490_h17.g1 CHROMAT_FILE:
MSMg01no490_h17.g1 PHD_FILE: MSMg01no490_h17.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:14:05 2005
(628 letters)
>mm_chr6_51564604_51565634
Length = 1031
Score = 1145 bits (592), Expect = 0.0
Identities = 620/631 (98%), Gaps = 3/631 (0%)
Strand = Plus / Minus
Query: 1 actgccaggcacatcacaagtgtgctgcatgatggaacacaacttgggccaggagtggga 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 831 actgccaggcacatcacaagtgtgctgcatgatggaacacaacttgggccaggagtggga 772
Query: 61 aaacagacacatggctgatagctgcaggtggttgacttggcagtgtgggccagcattgaa 120
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 771 aaacagacacacggctgatagctgcaggtggttgacttggcagtgtgggccagcattgaa 712
Query: 121 ctgtacatttctttgcctcagaacctccactgctggacatttaccctacaaatgtttgtc 180
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 711 ctgtacatttctttgcctcagaacctccactgctggacatttaccctacaaacgtttgtc 652
Query: 181 tacatttggaagtgcaaacacatgctcaatgttttgagggtagaaatggtgggcctttaa 240
||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||
Sbjct: 651 tacatttggaagtgcaaacacatgctcaatgttgtgagggtagaaatggcgggcctttaa 592
Query: 241 aaaaaatggcttccttatcctgtcgaactcgtgcagtcattacaaaagatgagcagagat 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 591 aaaaaatggcttccttatcctgtcgaactcgtgcagtcattacaaaagatgagcagagat 532
Query: 301 gttcaatctattattaattaataattaagaccttgaagaataatgtttcttgttaactca 360
|||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 531 gttcaatctactattaattaataatcaagaccttgaagaataatgtttcttgttaactca 472
Query: 361 cttgtgtaactaaagaacagaaacatacaattgtccacgtacaaaagtactggaagaata 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 471 cttgtgtaactaaagaacagaaacatacaattgtccacgtacaaaagtactggaagaata 412
Query: 421 tac---aaaaaaaaataagtggttgtgacattgcaaagtatagaagaaggagcggaggga 477
||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 411 tacaaaaaaaaaaaatcagtggttgtgacattgcaaagtatagaagaaggagcggaggga 352
Query: 478 agattttatcttgttttatatagttgaattttgttactactgaatatgtcgccttcatga 537
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 351 agattttatcttgttttatatagttgaattttgttactactgaatatgtcgccttcatga 292
Query: 538 tttttagcctctttcatcttcttactcacttttgctttatctatcttgggttagccatta 597
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 291 tttttagcctctttcatcttcttactcacttttgctttatctatcttgggttagccatta 232
Query: 598 agttttctcaagattgaggntatttattttg 628
||||||||||||||||||| |||||||||||
Sbjct: 231 agttttctcaagattgaggttatttattttg 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 628
Length of database: 1031
Length adjustment: 10
Effective length of query: 618
Effective length of database: 1021
Effective search space: 630978
Effective search space used: 630978
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
