Query= MSMg01no492_h18.b1 MSMg01no492_h18.b1 CHROMAT_FILE:
MSMg01no492_h18.b1 PHD_FILE: MSMg01no492_h18.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:16:44 2005
(674 letters)
>mm_chr6_23097802_23098875
Length = 1074
Score = 1201 bits (621), Expect = 0.0
Identities = 661/677 (97%), Gaps = 6/677 (0%)
Strand = Plus / Minus
Query: 1 aattcattaaatctttc---caagaaaacataatcaaagtaaaatgattagaaggcatga 57
||||||||||||| | ||||||||||||||||||||||||||||||||||||||||
Sbjct: 874 aattcattaaatc---ccaacaagaaaacataatcaaagtaaaatgattagaaggcatga 818
Query: 58 gtaatctttctgtttagaagagaattttagtgagtggggtctcagggctctatggcagag 117
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 817 gtaatctttctgtttagaagagaattttagtgagtggggtctcagggctctatggcagag 758
Query: 118 agtcatccacatatgtatccatagagtctttttatttaagagttaaatattgctatcctg 177
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 757 agtcatccacatatgtatccatagagtctttttatttaagagttaaatattgctatcctg 698
Query: 178 actctttaaagaacatttacacttgctcaaccttaaattaaataattccagagtcacaag 237
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 697 actctttaaagaacatttacacttgctcaaccttaaattaaataattccagagtcacaag 638
Query: 238 ttttaaaaatggcagtgtgaccaagtatgctgatttgtatctagttttgctattgttttt 297
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 637 ttttaaaaatggcagtgtgaccaagtatgctgattagtatctagttttgctattgttttt 578
Query: 298 gtgtccccaggggctgacgtctatgaatagtatctttagaggattcttctaagttggagt 357
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 577 gtgtcccctggggctgacgtctatgaatagtatctttagaggattcttctaagttggagt 518
Query: 358 atcaagggatcgatcagagtactgagaaatcaatggattaataggatttcctgctgggta 417
||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||
Sbjct: 517 atcaagggatcgatcagagtattgagaaatcaatggatcaataggatttcctgctgggta 458
Query: 418 ttagtgagatattctggttaaagttctggttaaagtaggaggaagaagagctgctatagg 477
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 457 ttagtgagatattctggttaaagttctggttaaagtaggaggaagaagagctgctgtagg 398
Query: 478 actccctgaatgagtcatcttcgttccactgagactctgacttgtgatgttccctgaaga 537
|||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||
Sbjct: 397 actccctgaatgagtcatcttcattccactgagactctgactagtgatgttccctgaaga 338
Query: 538 ggttttggtaggtagctgctcaaaatgagatcatggggtcaggatacagtgtatttgagc 597
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 337 ggctttggtaggtagctgctcaaaatgagatcatggggtcaggatacagtgtatttgagc 278
Query: 598 atagggttaacttccttgagaagaggaaatgggatgccacaaaactactatggagggtgg 657
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 277 atagggttaacttccttgtgaagaggaaatgggatgccacaaaactactatggagggtgg 218
Query: 658 tgggcagccatggtccc 674
||||||| |||||||||
Sbjct: 217 tgggcagtcatggtccc 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 32
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 674
Length of database: 1074
Length adjustment: 10
Effective length of query: 664
Effective length of database: 1064
Effective search space: 706496
Effective search space used: 706496
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no492_h18.g1 MSMg01no492_h18.g1 CHROMAT_FILE:
MSMg01no492_h18.g1 PHD_FILE: MSMg01no492_h18.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:16:44 2005
(657 letters)
>mm_chr6_22912849_22913909
Length = 1061
Score = 1201 bits (621), Expect = 0.0
Identities = 650/661 (98%), Gaps = 4/661 (0%)
Strand = Plus / Plus
Query: 1 gtgaaagaatcaaaaggccatttaaacatgtagataattacatttgtggattataaccag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 gtgaaagaatcaaaaggccatttaaacatgtagataattacatttgtggattataaccag 260
Query: 61 gaaggattacatattaactatccaggaataaaatcatatttattaaatgttgtcaaagaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gaaggattacatattaactatccaggaataaaatcatatttattaaatgttgtcaaagaa 320
Query: 121 ataaaaaccaactatttaagtatataacatctcacatctaaagtttaagcttcatgcaat 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ataaaaaccaactatttaagtatataacatctcacatctaaagtttaagcttcatgcaat 380
Query: 181 attacctactttttaaatgacttt---aaaaaaaagctatccacaaaaaagccttgagca 237
||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 381 attacctacttttaaaatgactttaaaaaaaaaaagctatccacaaaaaagccttgagca 440
Query: 238 atc-aattatatataaaagactgtatgcattaaattccaaataaatattttcttcaaaag 296
||| || || ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 atcaaaataaatataaaagactgtatgcattaaattccaaataaatattttcttcaaaag 500
Query: 297 actctttttggaagggttgtttgttggcttgtctgcttgttggttttttctttactctat 356
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 501 actctttttggaagggttgtttgttggcttgtctgcttgtttgttttttctttactctat 560
Query: 357 tgctttataaagatgtattccaggcttgagatatagctcagcgattaagaattgtgtact 416
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 tgctttataaagatgtatttcaggcttgagatatagctcagcgattaagaattgtgtact 620
Query: 417 gctcttgcagcggacccagttcagttcccagcagcaatgaaatgacccacaaatgccagt 476
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 gctcttgcagcagacccagttcagttcccagcagcaatgaaatgacccacaaatgccagt 680
Query: 477 aactccatctccagaggatccaactccccctaaaggtctctaacagtaactgcactcacc 536
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 aactccatctccagaggatccaactccccctaaaggtctctaacagtaactgcactcacc 740
Query: 537 tgcacacacttccaccaagacatacacataagtacttaattaaaaataaaaataagccaa 596
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 tgcacacacttccaccaagacatacacataagtacttaattaaaaataaaaataagccaa 800
Query: 597 gtctgaagagttggcttagtggttacgagcatttgtggttcttgcagaggaccggggttc 656
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 801 gtctgaagagttggcttagtggttacaagcatttgtggttcttgcagaggaccggggttc 860
Query: 657 a 657
|
Sbjct: 861 a 861
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 33
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 657
Length of database: 1061
Length adjustment: 10
Effective length of query: 647
Effective length of database: 1051
Effective search space: 679997
Effective search space used: 679997
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
