Query= MSMg01no494_e11.b1 MSMg01no494_e11.b1 CHROMAT_FILE:
MSMg01no494_e11.b1 PHD_FILE: MSMg01no494_e11.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:19:05 2005
(665 letters)
>mm_chr6_33927398_33928462
Length = 1065
Score = 1270 bits (657), Expect = 0.0
Identities = 663/665 (99%)
Strand = Plus / Plus
Query: 1 tctctgaatggaccagggccattacagtcaagattcttgctctgagacatggcaatggcc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tctctgaatggaccagggccattacagtcaagattcttgctctgagacatggcaatggcc 260
Query: 61 acctccccgggaccagggcatgaatatagactaacaaagaatgaagcagagcagagtcta 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 acctccccgggaccagggcatgaatatagactaacaaagaatgaagcagagcagagtcta 320
Query: 121 gccccaggacccagcaagtccgtgctggattccctccatctagggcagatgtgagcagag 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gccccaggacccagcaagtccgtgctggattccctccatctagggcagatgtgagcagag 380
Query: 181 accgaaaaaaatggccagccatccacaggctgtagaaacaaggagtgttctggtcaagaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 accgaaaaaaatggccagccatccacaggctgtagaaacaaggagtgttctggtcaagaa 440
Query: 241 agtttggattgaaaagcagagtgtgtgttgtaatacacacctgagagcaattgtcttaat 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 agtttggattgaaaagcagagtgtgtgttgtaatacacacctgagagcaattgtcttaat 500
Query: 301 gtggcatggatgtaaaacaaattgggtataatttggagggagggtaatgaggtaccaaga 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 gtggcatggatgtaaaacaaattgggtataatttggagggagggtaatgaggtaccaaga 560
Query: 361 acaggaaaacataaagaaccgctaggctccgcagaggtctcaactctgtcctaattagac 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 acaggaaaacataaagaaccgctaggctccgcagaggtctcaactctgtcctaattagac 620
Query: 421 acagttgttataagaagtacataattaataagcatgtgaccagatgtggaataccacgga 480
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 621 acagttgttataagaagtacataattaataagcatgtgaccagatgtggattaccacgga 680
Query: 481 gttcttttcctgacatggacgtggtaatgaactgtgcgcagctggaagtagttgtcctgc 540
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 gttcttttcctgacacggacgtggtaatgaactgtgcgcagctggaagtagttgtcctgc 740
Query: 541 ttgggctgcggcagaaggcctgcctggaattttgaagaggtgtagaaagatgcaccgcac 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 ttgggctgcggcagaaggcctgcctggaattttgaagaggtgtagaaagatgcaccgcac 800
Query: 601 aggtttacacctggaaacaagtaatcctattccagccgggctggggtaatgagatggagc 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 801 aggtttacacctggaaacaagtaatcctattccagccgggctggggtaatgagatggagc 860
Query: 661 taatt 665
|||||
Sbjct: 861 taatt 865
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 32
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 665
Length of database: 1065
Length adjustment: 10
Effective length of query: 655
Effective length of database: 1055
Effective search space: 691025
Effective search space used: 691025
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no494_e11.g1 MSMg01no494_e11.g1 CHROMAT_FILE:
MSMg01no494_e11.g1 PHD_FILE: MSMg01no494_e11.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:19:05 2005
(240 letters)
>mm_chr6_34066006_34066644
Length = 639
Score = 426 bits (220), Expect = e-124
Identities = 235/240 (97%), Gaps = 1/240 (0%)
Strand = Plus / Minus
Query: 1 aactgcactggacttcctagaatagtcttcgcatttcaggtaagacgtcttagtatctgg 60
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 439 aactgtactggacttcctagaatagtcttcgcatttcaggtaagacgtcttagtatctgg 380
Query: 61 tgaggaaaacataaatttgtgagtgaaacatacaacagagtaaatttcttgatgtgacat 120
|||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 379 tgagaaaaacataaatttgtgaatgaaacatacaacagagtaaatttcttgatgtgacat 320
Query: 121 gacagcaatgttttatattttatttcttcaaacacaagaaattgtgtacttaaagtttgt 180
|||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||
Sbjct: 319 gacagcaatgttttatattttatttcttcaaacacaagaaattgtgtatttaa-gtttgt 261
Query: 181 gcatttcaacttggaaataaataagatacattttacagtaacgataaaattaatgttggc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 260 gcatttcaacttggaaataaataagatacattttacagtaacgataaaattaatgttggc 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 240
Length of database: 639
Length adjustment: 9
Effective length of query: 231
Effective length of database: 630
Effective search space: 145530
Effective search space used: 145530
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
