TGCAGCGCCGTAACGAATGGTGGTCATCTCTCAATAAAAAACCGGCAGGA
TTTATAAGCGTTTTTTCTCCTTCTTGGTCCGTTGGGTTCNNCCGCTTATG
GTGACAGCGACTGTCTCCTTACGGATTTTATTTAATCTCGTTCCCCCCTC
AATAGAACAAACGTACACCGTGCGCTTGGCGTCGTCCTGGCCGCGTGGTG
ATTGCGTGTCTCGCGCGGCATCGAGGTTCATGTGTCCAATTTAATACGTT
ACAGTCACTAGTGTTCTCGATAGCGCGCGAATATTGCGATAAAACCCATA
ATTTATAAACACTCTCGGATATTGCGCGGCGTTCGCTGGGTGCTTTCGCA
TGCTTCCGGAGATCGGGATACGCTACCCGCCGATAGTACGCCGCCGCCAC
GACACCCTCGATAGCGCCTCGTCGTGTTGGTTACTTGCCACACTCGACTG
CGCCGCCAGATTCTCAAGCGTACGAACATAGACCCGCGCGCCAGTAAGTT
GTTCCGTATACATTACACCTCGGGCGCGTGTTATATGACACCCAAACCTT
TCTACCCTGTTCCCGTTAATATCCCATATTCACGATTACTACATCATTAA
CTTCCTTGCCAGCGGCTGTGGGTGCGATCGACGGTCCATGCCCTGCGATG
TTCTATTGCGCGTCCTTGCCCGTTTTCTGTATCCGTATAATGATAGACGC
GATGGATATAAGGTGGCGAGTGAGCGACCACGTGTCCACAGTTTTCATCT
TCACTCTCTGCACCCGCGCGCATTATATTTAAGCGCGANACGCATTGNTA
GCGCTTCATATGATTCAGGCCGGCTCACGTCCGCGTAGTACACCACACAC
ATATAGATTACTCGCGNACATATATTACATACGATATCGCGCACCCCATT
GCTAGTTATAANGGACCGTACAGCACACTACATCACTAGACACGCAGCAT
GACAATCACTATTTCATATAATATAGCGTGTGAGCGTCGTCGCTGAAGTA
TTCGCGAACCACTATATACAGTCGTGATGATCATGAGACGCTGTANCAGA
TAATATTCTCGCGCGACGATCACGACATATCGCACGTCTGTACTCTCTCT
GCCAGCGTGGATATGAGATCAGTGAGCGCTGCGCGAANACGACACAGTAT
GCGCATCAACCTCATAAGCACGACTNTATAATACTCGCGACACTAGCACG
TCCGAGATATAGACGCTAGCATTAGTGATAGTTCTCAGAGN

XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXTCTGACATCTCTCAACAAGTATATTGGGCTATTAGTCA
CAATTTTCACTATTGACAGATCGCTGTTGCAAAAATTCCAACTGAATGAA
TCATAGGTTGTCTTGGACTACATGCTAGAAGAGGTAAACTGAGTCTCCTT
CCTTCACACCGTAGAGTGTAGCGGAGTATTACATACAAGTTGGTATTTAC
ATGGATGGATAGATAGATGGGATACATTTAACCTTTTACTAAGTTTAGAC
ATTTTGGCTAGCATCCCAGTAATTCACCCACATGAATAATACTTAAATGC
TTAAAGATTAATGGTTGTGTCCAGGTTAGGCTTTGGTCTGTAGTTATCAG
CCTATCTCTAATGATAATGAGCAAGTATTAACATTGAGTTCAATCTCTCA
CATGGCAGGTCTTTTGCTTGGGTCATAAGCATATTTCCTGTGTTAATCTT
CACAAATCTGAAATGTGACCTGTTGATTAAAAGGTAGCTTGTCATGTATT
CAGCCACAATGAAGTAATTTTTCCTAAGGAGGCAACTTGCCTAGACTCTA
GAGATACAAACTCCAACCCCTAGTTCTTTCTATTATACCGCCTGCCTTAG
GCAGCATGTATATTGCTGTTATAAGACAGCATGACCAAAAACAACTTGGG
GGAAAAAAGTTTTTTTTTTCTCTACAGATTN

Query= MSMg01no494_l15.g1 MSMg01no494_l15.g1 CHROMAT_FILE:
MSMg01no494_l15.g1 PHD_FILE: MSMg01no494_l15.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:19:38 2005
         (666 letters)



>mm_chr6_98359158_98360223
          Length = 1066

 Score = 1272 bits (658), Expect = 0.0
 Identities = 665/668 (99%), Gaps = 2/668 (0%)
 Strand = Plus / Minus

                                                                       
Query: 1   tctgacatctctcaacaagtatattgggctattagtcacaattttcactattgacagatc 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 780 tctgacatctctcaacaagtatattgggctattagtcacaattttcactattgacagatc 721

                                                                       
Query: 61  gctgttgcaaaaattccaactgaatgaatcataggttgtcttggactacatgctagaaga 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 720 gctgttgcaaaaattccaactgaatgaatcataggttgtcttggactacatgctagaaga 661

                                                                       
Query: 121 ggtaaactgagtctccttccttcacaccgtagagtgtagcggagtattacatacaagttg 180
           ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 660 ggtaaactgagtctccttccttcacaccgtagagtatagcggagtattacatacaagttg 601

                                                                       
Query: 181 gtatttacatggatggatagatagatgggatacatttaaccttttactaagtttagacat 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 600 gtatttacatggatggatagatagatgggatacatttaaccttttactaagtttagacat 541

                                                                       
Query: 241 tttggctagcatcccagtaattcacccacatgaataatacttaaatgcttaaagattaat 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 540 tttggctagcatcccagtaattcacccacatgaataatacttaaatgcttaaagattaat 481

                                                                       
Query: 301 ggttgtgtccaggttaggctttggtctgtagttatcagcctatctctaatgataatgagc 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 480 ggttgtgtccaggttaggctttggtctgtagttatcagcctatctctaatgataatgagc 421

                                                                       
Query: 361 aagtattaacattgagttcaatctctcacatggcaggtcttttgcttgggtcataagcat 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 420 aagtattaacattgagttcaatctctcacatggcaggtcttttgcttgggtcataagcat 361

                                                                       
Query: 421 atttcctgtgttaatcttcacaaatctgaaatgtgacctgttgattaaaaggtagcttgt 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 360 atttcctgtgttaatcttcacaaatctgaaatgtgacctgttgattaaaaggtagcttgt 301

                                                                       
Query: 481 catgtattcagccacaatgaagtaatttttcctaaggaggcaacttgcctagactctaga 540
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 300 catgtattcagccacaatgaagtaatttttcctaaggaggcaacttgcctagactctaga 241

                                                                       
Query: 541 gatacaaactccaacccctagttctttctattataccgcctgccttaggcagcatgtata 600
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 240 gatacaaactccaacccctagttctttctattataccgcctgccttaggcagcatgtata 181

                                                                       
Query: 601 ttgctgttataagacagcatgaccaaaaacaacttgggggaaaaaagtttttttttt--c 658
           |||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |
Sbjct: 180 ttgctgttataagacagcatgaccaaaaacaacttgggggaaaaaagttttttttttttc 121

                   
Query: 659 tctacaga 666
           ||||||||
Sbjct: 120 tctacaga 113


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 33
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 666
Length of database: 1066
Length adjustment: 10
Effective length of query: 656
Effective length of database: 1056
Effective search space:   692736
Effective search space used:   692736
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)